Analysis of interatomic Contacts of Structural Units in PDB entry:
6CP0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CP0 entry

There are 2 chains in PDB entry 6CP0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 6LEU 523
B
 LEU -1MET 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6CP0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 47Right-handed 310
Helix 2
AA2
A
48 57Right-handed alpha
Helix 3
AA3
A
66 92Right-handed alpha
Helix 4
AA4
A
96 124Right-handed alpha
Helix 5
AA5
A
128 136Right-handed alpha
Helix 6
AA6
A
142 152Right-handed alpha
Helix 7
AA7
A
196 206Right-handed alpha
Helix 8
AA8
A
220 231Right-handed alpha
Helix 9
AA9
A
243 263Right-handed alpha
Helix 10
AB1
A
278 285Right-handed alpha
Helix 11
AB2
A
294 307Right-handed alpha
Helix 12
AB3
A
336 361Right-handed alpha
Helix 13
AB4
A
367 373Right-handed alpha
Helix 14
AB5
A
374 392Right-handed alpha
Helix 15
AB6
A
394 407Right-handed alpha
Helix 16
AB7
A
417 436Right-handed alpha
Helix 17
AB8
A
466 474Right-handed alpha
Helix 18
AB9
A
480 484Right-handed 310
Helix 19
AC1
A
485 492Right-handed alpha
Helix 20
AC2
A
502 507Right-handed alpha
Helix 21
AC3
A
508 521Right-handed alpha
Helix 22
AC4
B
0 16Right-handed alpha
Helix 23
AC5
B
86 90Right-handed 310
Helix 24
AC6
B
98 112Right-handed alpha
Helix 25
AC7
B
120 130Right-handed alpha
Helix 26
AC8
B
130 146Right-handed alpha
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There are 4 sheets in PDB entry 6CP0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
27 35anti-parallel
Strand 3
A
461 465anti-parallel
Strand 4
A
456 458anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 177first strand
Strand 2
A
155 159parallel
Strand 3
A
443 447anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
333 334anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 25first strand
Strand 2
B
32 38anti-parallel
Strand 3
B
49 55anti-parallel
Strand 4
B
66 69anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il