Analysis of interatomic Contacts of Structural Units in PDB entry:
6CP6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CP6 entry

There are 27 chains in PDB entry 6CP6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
K
GLN 2PHE 74
L
GLN 2PHE 74
M
GLN 2GLY 75
N
GLN 2PHE 74
O
GLN 2PHE 74
P
GLN 2PHE 74
Q
GLN 2PHE 74
R
GLN 2GLY 75
S
GLN 2PHE 74
T
GLN 2PHE 74
Y
PRO 7SER 194
A
LYS 4PHE 510
B
LYS 4THR 509
C
THR 3PHE 510
D
SER 6ALA 475
E
SER 6ASN 478
F
THR 7ASN 478
G
ALA 1GLY 278
H
SER 7LYS 138
I
SER 1ILE 59
Z
ASN 53LYS 207
7
ALA 3MET 173
6
GLN 4HIS 92
U
VAL 1HIS 85
8
PHE 7LEU 48
X
LEU 26HIS 249
J
MET 1THR 37
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are222 helices in PDB entry 6CP6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
K
2 15Right-handed alpha
Helix 2
AA2
K
18 40Right-handed alpha
Helix 3
AA3
K
43 74Right-handed alpha
Helix 4
AA4
L
3 15Right-handed alpha
Helix 5
AA5
L
16 18Right-handed 310
Helix 6
AA6
L
19 24Right-handed alpha
Helix 7
AA7
L
24 39Right-handed alpha
Helix 8
AA8
L
40 44Right-handed 310
Helix 9
AA9
L
47 74Right-handed alpha
Helix 10
AB1
M
3 14Right-handed alpha
Helix 11
AB2
M
16 18Right-handed 310
Helix 12
AB3
M
19 24Right-handed alpha
Helix 13
AB4
M
24 38Right-handed alpha
Helix 14
AB5
M
43 74Right-handed alpha
Helix 15
AB6
N
2 15Right-handed alpha
Helix 16
AB7
N
16 18Right-handed 310
Helix 17
AB8
N
19 38Right-handed alpha
Helix 18
AB9
N
43 74Right-handed alpha
Helix 19
AC1
O
2 15Right-handed alpha
Helix 20
AC2
O
16 18Right-handed 310
Helix 21
AC3
O
19 38Right-handed alpha
Helix 22
AC4
O
40 42Right-handed 310
Helix 23
AC5
O
43 57Right-handed alpha
Helix 24
AC6
O
58 72Right-handed alpha
Helix 25
AC7
P
2 15Right-handed alpha
Helix 26
AC8
P
18 40Right-handed alpha
Helix 27
AC9
P
47 74Right-handed alpha
Helix 28
AD1
Q
3 15Right-handed alpha
Helix 29
AD2
Q
18 40Right-handed alpha
Helix 30
AD3
Q
46 74Right-handed alpha
Helix 31
AD4
R
3 15Right-handed alpha
Helix 32
AD5
R
16 18Right-handed 310
Helix 33
AD6
R
19 39Right-handed alpha
Helix 34
AD7
R
40 42Right-handed 310
Helix 35
AD8
R
43 75Right-handed alpha
Helix 36
AD9
S
3 17Right-handed alpha
Helix 37
AE1
S
18 38Right-handed alpha
Helix 38
AE2
S
40 44Right-handed 310
Helix 39
AE3
S
46 63Right-handed alpha
Helix 40
AE4
S
65 74Right-handed alpha
Helix 41
AE5
T
3 15Right-handed alpha
Helix 42
AE6
T
16 18Right-handed 310
Helix 43
AE7
T
19 38Right-handed alpha
Helix 44
AE8
T
40 42Right-handed 310
Helix 45
AE9
T
43 62Right-handed alpha
Helix 46
AF1
T
63 72Right-handed alpha
Helix 47
AF2
Y
17 28Right-handed alpha
Helix 48
AF3
Y
29 31Right-handed 310
Helix 49
AF4
Y
32 50Right-handed alpha
Helix 50
AF5
Y
64 77Right-handed alpha
Helix 51
AF6
Y
83 95Right-handed alpha
Helix 52
AF7
Y
101 117Right-handed alpha
Helix 53
AF8
Y
130 144Right-handed alpha
Helix 54
AF9
Y
180 191Right-handed alpha
Helix 55
AG1
A
5 18Right-handed alpha
Helix 56
AG2
A
18 23Right-handed alpha
Helix 57
AG3
A
80 84Right-handed 310
Helix 58
AG4
A
102 106Right-handed 310
Helix 59
AG5
A
152 159Right-handed alpha
Helix 60
AG6
A
176 187Right-handed alpha
Helix 61
AG7
A
188 193Right-handed alpha
Helix 62
AG8
A
211 225Right-handed alpha
Helix 63
AG9
A
241 261Right-handed alpha
Helix 64
AH1
A
273 287Right-handed alpha
Helix 65
AH2
A
292 296Right-handed 310
Helix 66
AH3
A
297 298Right-handed 310
Helix 67
AH4
A
299 309Right-handed alpha
Helix 68
AH5
A
338 348Right-handed alpha
Helix 69
AH6
A
355 361Right-handed alpha
Helix 70
AH7
A
376 381Right-handed 310
Helix 71
AH8
A
382 403Right-handed alpha
Helix 72
AH9
A
404 408Right-handed 310
Helix 73
AI1
A
413 431Right-handed alpha
Helix 74
AI2
A
439 452Right-handed alpha
Helix 75
AI3
A
462 478Right-handed alpha
Helix 76
AI4
A
478 489Right-handed alpha
Helix 77
AI5
A
492 510Right-handed alpha
Helix 78
AI6
B
5 18Right-handed alpha
Helix 79
AI7
B
102 106Right-handed 310
Helix 80
AI8
B
152 159Right-handed alpha
Helix 81
AI9
B
176 188Right-handed alpha
Helix 82
AJ1
B
188 193Right-handed alpha
Helix 83
AJ2
B
211 225Right-handed alpha
Helix 84
AJ3
B
227 229Right-handed 310
Helix 85
AJ4
B
241 262Right-handed alpha
Helix 86
AJ5
B
272 287Right-handed alpha
Helix 87
AJ6
B
292 296Right-handed 310
Helix 88
AJ7
B
297 298Right-handed 310
Helix 89
AJ8
B
299 309Right-handed alpha
Helix 90
AJ9
B
338 346Right-handed alpha
Helix 91
AK1
B
355 361Right-handed alpha
Helix 92
AK2
B
376 381Right-handed 310
Helix 93
AK3
B
382 389Right-handed alpha
Helix 94
AK4
B
389 406Right-handed alpha
Helix 95
AK5
B
407 409Right-handed 310
Helix 96
AK6
B
413 430Right-handed alpha
Helix 97
AK7
B
439 452Right-handed alpha
Helix 98
AK8
B
462 477Right-handed alpha
Helix 99
AK9
B
478 489Right-handed alpha
Helix 100
AL1
B
492 508Right-handed alpha
Helix 101
AL2
C
10 20Right-handed alpha
Helix 102
AL3
C
102 106Right-handed 310
Helix 103
AL4
C
152 159Right-handed alpha
Helix 104
AL5
C
176 188Right-handed alpha
Helix 105
AL6
C
188 193Right-handed alpha
Helix 106
AL7
C
211 226Right-handed alpha
Helix 107
AL8
C
227 229Right-handed 310
Helix 108
AL9
C
241 261Right-handed alpha
Helix 109
AM1
C
272 287Right-handed alpha
Helix 110
AM2
C
292 296Right-handed 310
Helix 111
AM3
C
297 298Right-handed 310
Helix 112
AM4
C
299 309Right-handed alpha
Helix 113
AM5
C
338 346Right-handed alpha
Helix 114
AM6
C
355 361Right-handed alpha
Helix 115
AM7
C
376 381Right-handed 310
Helix 116
AM8
C
382 389Right-handed alpha
Helix 117
AM9
C
391 408Right-handed alpha
Helix 118
AN1
C
413 430Right-handed alpha
Helix 119
AN2
C
439 452Right-handed alpha
Helix 120
AN3
C
459 461Right-handed 310
Helix 121
AN4
C
462 477Right-handed alpha
Helix 122
AN5
C
478 489Right-handed alpha
Helix 123
AN6
C
492 509Right-handed alpha
Helix 124
AN7
D
88 92Right-handed 310
Helix 125
AN8
D
138 145Right-handed alpha
Helix 126
AN9
D
162 175Right-handed alpha
Helix 127
AO1
D
190 205Right-handed alpha
Helix 128
AO2
D
225 246Right-handed alpha
Helix 129
AO3
D
257 270Right-handed alpha
Helix 130
AO4
D
284 295Right-handed alpha
Helix 131
AO5
D
313 316Right-handed 310
Helix 132
AO6
D
319 326Right-handed alpha
Helix 133
AO7
D
327 329Right-handed 310
Helix 134
AO8
D
336 341Right-handed alpha
Helix 135
AO9
D
359 364Right-handed alpha
Helix 136
AP1
D
364 392Right-handed alpha
Helix 137
AP2
D
393 396Right-handed 310
Helix 138
AP3
D
397 414Right-handed alpha
Helix 139
AP4
D
421 426Right-handed alpha
Helix 140
AP5
D
433 446Right-handed alpha
Helix 141
AP6
D
453 458Right-handed 310
Helix 142
AP7
D
462 473Right-handed alpha
Helix 143
AP8
E
88 92Right-handed 310
Helix 144
AP9
E
138 144Right-handed alpha
Helix 145
AQ1
E
162 178Right-handed alpha
Helix 146
AQ2
E
190 204Right-handed alpha
Helix 147
AQ3
E
225 230Right-handed alpha
Helix 148
AQ4
E
231 246Right-handed alpha
Helix 149
AQ5
E
257 272Right-handed alpha
Helix 150
AQ6
E
277 281Right-handed 310
Helix 151
AQ7
E
284 294Right-handed alpha
Helix 152
AQ8
E
319 326Right-handed alpha
Helix 153
AQ9
E
336 342Right-handed alpha
Helix 154
AR1
E
359 391Right-handed alpha
Helix 155
AR2
E
392 396Right-handed 310
Helix 156
AR3
E
399 414Right-handed alpha
Helix 157
AR4
E
433 447Right-handed alpha
Helix 158
AR5
E
453 458Right-handed 310
Helix 159
AR6
E
462 477Right-handed alpha
Helix 160
AR7
F
88 92Right-handed 310
Helix 161
AR8
F
138 145Right-handed alpha
Helix 162
AR9
F
162 175Right-handed alpha
Helix 163
AS1
F
190 204Right-handed alpha
Helix 164
AS2
F
225 230Right-handed alpha
Helix 165
AS3
F
231 246Right-handed alpha
Helix 166
AS4
F
257 270Right-handed alpha
Helix 167
AS5
F
284 294Right-handed alpha
Helix 168
AS6
F
313 316Right-handed 310
Helix 169
AS7
F
319 327Right-handed alpha
Helix 170
AS8
F
336 342Right-handed alpha
Helix 171
AS9
F
364 391Right-handed alpha
Helix 172
AT1
F
392 396Right-handed 310
Helix 173
AT2
F
397 415Right-handed alpha
Helix 174
AT3
F
421 426Right-handed alpha
Helix 175
AT4
F
433 446Right-handed alpha
Helix 176
AT5
F
453 458Right-handed 310
Helix 177
AT6
F
462 477Right-handed alpha
Helix 178
AT7
G
2 55Right-handed alpha
Helix 179
AT8
G
87 102Right-handed alpha
Helix 180
AT9
G
111 122Right-handed alpha
Helix 181
AU1
G
139 154Right-handed alpha
Helix 182
AU2
G
184 190Right-handed alpha
Helix 183
AU3
G
191 195Right-handed 310
Helix 184
AU4
G
200 203Right-handed 310
Helix 185
AU5
G
204 276Right-handed alpha
Helix 186
AU6
H
98 113Right-handed alpha
Helix 187
AU7
H
116 138Right-handed alpha
Helix 188
AU8
I
9 24Right-handed alpha
Helix 189
AU9
I
31 38Right-handed alpha
Helix 190
AV1
Z
55 112Right-handed alpha
Helix 191
AV2
Z
115 133Right-handed alpha
Helix 192
AV3
Z
134 185Right-handed alpha
Helix 193
AV4
Z
187 205Right-handed alpha
Helix 194
AV5
7
4 19Right-handed alpha
Helix 195
AV6
7
26 48Right-handed alpha
Helix 196
AV7
7
57 62Right-handed alpha
Helix 197
AV8
7
67 78Right-handed alpha
Helix 198
AV9
7
90 127Right-handed alpha
Helix 199
AW1
7
134 142Right-handed alpha
Helix 200
AW2
7
142 156Right-handed alpha
Helix 201
AW3
6
5 17Right-handed alpha
Helix 202
AW4
6
18 23Right-handed alpha
Helix 203
AW5
6
42 45Right-handed 310
Helix 204
AW6
6
46 51Right-handed alpha
Helix 205
AW7
6
77 92Right-handed alpha
Helix 206
AW8
U
17 32Right-handed alpha
Helix 207
AW9
U
48 56Right-handed alpha
Helix 208
AX1
U
63 85Right-handed alpha
Helix 209
AX2
8
8 31Right-handed alpha
Helix 210
AX3
8
32 48Right-handed alpha
Helix 211
AX4
X
27 42Right-handed alpha
Helix 212
AX5
X
56 77Right-handed alpha
Helix 213
AX6
X
82 84Right-handed 310
Helix 214
AX7
X
85 100Right-handed alpha
Helix 215
AX8
X
114 137Right-handed alpha
Helix 216
AX9
X
139 146Right-handed 310
Helix 217
AY1
X
151 153Right-handed 310
Helix 218
AY2
X
154 175Right-handed alpha
Helix 219
AY3
X
177 199Right-handed alpha
Helix 220
AY4
X
202 207Right-handed 310
Helix 221
AY5
X
210 247Right-handed alpha
Helix 222
AY6
J
13 32Right-handed alpha
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There are 27 sheets in PDB entry 6CP6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Y
122 124first strand
Strand 2
Y
168 171anti-parallel
Strand 3
Y
174 177anti-parallel
Strand 4
B
27 28anti-parallel
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There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
62 68first strand
Strand 2
A
53 57anti-parallel
Strand 3
A
89 96anti-parallel
Strand 4
A
30 37anti-parallel
Strand 5
A
40 45anti-parallel
Strand 6
A
72 77anti-parallel
Strand 7
A
62 68anti-parallel
Strand 8
E
10 17anti-parallel
Strand 9
E
75 78anti-parallel
Strand 10
E
36 41anti-parallel
Strand 11
E
44 53anti-parallel
Strand 12
E
58 63anti-parallel
Strand 13
E
20 25anti-parallel
Strand 14
E
10 17anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
98 100first strand
Strand 2
A
128 130anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
108 110first strand
Strand 2
A
231 236parallel
Strand 3
A
202 208parallel
Strand 4
A
265 271parallel
Strand 5
A
322 326parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
328 330first strand
Strand 2
A
168 171parallel
Strand 3
A
351 353parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
33 35first strand
Strand 2
B
41 43anti-parallel
Strand 3
B
73 77anti-parallel
Strand 4
B
62 68anti-parallel
Strand 5
F
11 17anti-parallel
Strand 6
B
53 56first strand
Strand 7
B
91 96anti-parallel
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There are 12 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
33 35first strand
Strand 2
B
41 43anti-parallel
Strand 3
B
73 77anti-parallel
Strand 4
B
62 68anti-parallel
Strand 5
F
75 78first strand
Strand 6
F
36 41anti-parallel
Strand 7
F
44 53anti-parallel
Strand 8
F
58 63anti-parallel
Strand 9
F
20 24anti-parallel
Strand 10
F
11 17anti-parallel
Strand 11
B
53 56first strand
Strand 12
B
91 96anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
98 101first strand
Strand 2
B
127 130anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
109 110first strand
Strand 2
B
231 236parallel
Strand 3
B
202 208parallel
Strand 4
B
265 271parallel
Strand 5
B
322 326parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
328 330first strand
Strand 2
B
168 171parallel
Strand 3
B
350 353parallel
Strand 4
B
373 374anti-parallel
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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
30 37first strand
Strand 2
C
40 45anti-parallel
Strand 3
C
73 77anti-parallel
Strand 4
C
62 68anti-parallel
Strand 5
C
53 57anti-parallel
Strand 6
C
89 96anti-parallel
Strand 7
C
30 37anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
98 101first strand
Strand 2
C
127 130anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
109 110first strand
Strand 2
C
231 236parallel
Strand 3
C
202 208parallel
Strand 4
C
265 271parallel
Strand 5
C
322 326parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
147 148first strand
Strand 2
C
161 162anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
328 330first strand
Strand 2
C
168 171parallel
Strand 3
C
351 354parallel
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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
10 17first strand
Strand 2
D
20 24anti-parallel
Strand 3
D
58 62anti-parallel
Strand 4
D
45 53anti-parallel
Strand 5
D
36 40anti-parallel
Strand 6
D
75 78anti-parallel
Strand 7
D
10 17anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
84 86first strand
Strand 2
D
114 116anti-parallel
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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
95 96first strand
Strand 2
D
215 221parallel
Strand 3
D
181 189parallel
Strand 4
D
251 256parallel
Strand 5
D
304 311parallel
Strand 6
D
152 157parallel
Strand 7
D
331 334parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
133 134first strand
Strand 2
D
147 148anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
84 87first strand
Strand 2
E
113 116anti-parallel
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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
95 96first strand
Strand 2
E
215 221parallel
Strand 3
E
182 189parallel
Strand 4
E
250 256parallel
Strand 5
E
303 309parallel
Strand 6
E
152 155parallel
Strand 7
E
331 333parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
133 134first strand
Strand 2
E
147 148anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
84 86first strand
Strand 2
F
114 116anti-parallel
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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
95 96first strand
Strand 2
F
215 220parallel
Strand 3
F
181 187parallel
Strand 4
F
250 256parallel
Strand 5
F
303 311parallel
Strand 6
F
152 157parallel
Strand 7
F
334 335parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
133 134first strand
Strand 2
F
147 148anti-parallel
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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
176 183first strand
Strand 2
G
161 168anti-parallel
Strand 3
G
72 77parallel
Strand 4
G
106 110parallel
Strand 5
G
126 131parallel
Strand 6
I
43 45anti-parallel
Strand 7
I
57 58anti-parallel
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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
22 27first strand
Strand 2
H
10 15anti-parallel
Strand 3
H
82 87parallel
Strand 4
H
65 78anti-parallel
Strand 5
H
49 60anti-parallel
Strand 6
H
29 34anti-parallel
Strand 7
H
37 41anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il