Analysis of interatomic Contacts of Structural Units in PDB entry:
6CPT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CPT entry

There is 1 chain in PDB entry 6CPT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 570
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6CPT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 34Right-handed alpha
Helix 2
AA2
A
35 38Right-handed 310
Helix 3
AA3
A
83 95Right-handed alpha
Helix 4
AA4
A
96 98Right-handed 310
Helix 5
AA5
A
111 125Right-handed alpha
Helix 6
AA6
A
126 135Right-handed alpha
Helix 7
AA7
A
157 161Right-handed 310
Helix 8
AA8
A
164 174Right-handed alpha
Helix 9
AA9
A
176 194Right-handed alpha
Helix 10
AB1
A
195 200Right-handed 310
Helix 11
AB2
A
204 217Right-handed alpha
Helix 12
AB3
A
221 225Right-handed 310
Helix 13
AB4
A
226 244Right-handed alpha
Helix 14
AB5
A
252 267Right-handed alpha
Helix 15
AB6
A
275 293Right-handed alpha
Helix 16
AB7
A
335 349Right-handed alpha
Helix 17
AB8
A
357 364Right-handed alpha
Helix 18
AB9
A
366 372Right-handed alpha
Helix 19
AC1
A
376 389Right-handed alpha
Helix 20
AC2
A
390 395Right-handed alpha
Helix 21
AC3
A
395 401Right-handed alpha
Helix 22
AC4
A
410 421Right-handed alpha
Helix 23
AC5
A
422 425Right-handed 310
Helix 24
AC6
A
426 439Right-handed alpha
Helix 25
AC7
A
445 463Right-handed alpha
Helix 26
AC8
A
464 468Right-handed 310
Helix 27
AC9
A
469 495Right-handed alpha
Helix 28
AD1
A
514 522Right-handed alpha
Helix 29
AD2
A
524 536Right-handed alpha
Helix 30
AD3
A
536 548Right-handed alpha
Helix 31
AD4
A
551 570Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6CPT.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 21first strand
Strand 2
A
2 6parallel
Strand 3
A
46 49parallel
Strand 4
A
100 103parallel
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