Analysis of interatomic Contacts of Structural Units in PDB entry:
6CQS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CQS entry

There is 1 chain in PDB entry 6CQS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 21PRO 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6CQS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 86Right-handed alpha
Helix 2
AA2
A
98 103Right-handed alpha
Helix 3
AA3
A
104 111Right-handed alpha
Helix 4
AA4
A
119 140Right-handed alpha
Helix 5
AA5
A
145 155Right-handed alpha
Helix 6
AA6
A
165 169Right-handed 310
Helix 7
AA7
A
207 209Right-handed 310
Helix 8
AA8
A
225 232Right-handed alpha
Helix 9
AA9
A
233 236Right-handed 310
Helix 10
AB1
A
251 261Right-handed alpha
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There are 2 sheets in PDB entry 6CQS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 27first strand
Strand 2
A
30 36anti-parallel
Strand 3
A
39 45anti-parallel
Strand 4
A
49 57anti-parallel
Strand 5
A
61 65anti-parallel
Strand 6
A
89 93parallel
Strand 7
A
115 118parallel
Strand 8
A
162 164parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 174first strand
Strand 2
A
177 182anti-parallel
Strand 3
A
194 196anti-parallel
Strand 4
A
202 206anti-parallel
Strand 5
A
240 243parallel
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