Analysis of interatomic Contacts of Structural Units in PDB entry:
6CRJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6CRJ entry

There are 3 chains in PDB entry 6CRJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	SER 10	LYS 540
A	ASP 29	LYS 540
C	ASP 29	LYS 540

There are 26 helices in PDB entry 6CRJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	13	17	Right-handed 310
Helix 2	AA2	B	38	45	Right-handed 310
Helix 3	AA3	B	86	89	Right-handed 310
Helix 4	AA4	B	90	98	Right-handed alpha
Helix 5	AA5	B	138	143	Right-handed alpha
Helix 6	AA6	B	236	240	Right-handed 310
Helix 7	AA7	B	282	286	Right-handed 310
Helix 8	AA8	B	368	371	Right-handed 310
Helix 9	AA9	B	454	465	Right-handed alpha
Helix 10	AB1	A	41	45	Right-handed 310
Helix 11	AB2	A	86	89	Right-handed 310
Helix 12	AB3	A	90	98	Right-handed alpha
Helix 13	AB4	A	138	143	Right-handed alpha
Helix 14	AB5	A	236	240	Right-handed 310
Helix 15	AB6	A	282	286	Right-handed 310
Helix 16	AB7	A	368	371	Right-handed 310
Helix 17	AB8	A	454	465	Right-handed alpha
Helix 18	AB9	C	38	42	Right-handed 310
Helix 19	AC1	C	53	58	Right-handed alpha
Helix 20	AC2	C	86	89	Right-handed 310
Helix 21	AC3	C	90	98	Right-handed alpha
Helix 22	AC4	C	138	143	Right-handed alpha
Helix 23	AC5	C	236	240	Right-handed 310
Helix 24	AC6	C	282	286	Right-handed 310
Helix 25	AC7	C	368	371	Right-handed 310
Helix 26	AC8	C	454	465	Right-handed alpha

There are 20 sheets in PDB entry 6CRJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	70	first strand
Strand 2	B	202	210	anti-parallel
Strand 3	B	107	112	anti-parallel
Strand 4	B	158	162	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	84	first strand
Strand 2	B	181	186	anti-parallel
Strand 3	B	122	128	anti-parallel
Strand 4	B	147	151	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	104	first strand
Strand 2	B	215	219	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	120	first strand
Strand 2	B	191	192	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	451	first strand
Strand 2	B	431	438	anti-parallel
Strand 3	B	251	254	anti-parallel
Strand 4	B	507	508	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	289	294	first strand
Strand 2	B	304	310	anti-parallel
Strand 3	B	373	378	anti-parallel
Strand 4	B	352	358	anti-parallel
Strand 5	B	332	341	anti-parallel
Strand 6	B	389	402	anti-parallel
Strand 7	B	289	294	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	427	429	first strand
Strand 2	B	496	500	anti-parallel
Strand 3	B	485	492	anti-parallel
Strand 4	B	472	478	anti-parallel
Strand 5	B	514	517	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	70	first strand
Strand 2	A	202	210	anti-parallel
Strand 3	A	107	114	anti-parallel
Strand 4	A	158	162	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	84	first strand
Strand 2	A	181	186	anti-parallel
Strand 3	A	122	128	anti-parallel
Strand 4	A	147	151	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	172	first strand
Strand 2	A	102	104	anti-parallel
Strand 3	A	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	120	first strand
Strand 2	A	191	192	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	451	first strand
Strand 2	A	431	438	anti-parallel
Strand 3	A	251	254	anti-parallel
Strand 4	A	507	508	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	294	first strand
Strand 2	A	304	310	anti-parallel
Strand 3	A	373	378	anti-parallel
Strand 4	A	352	358	anti-parallel
Strand 5	A	332	341	anti-parallel
Strand 6	A	389	402	anti-parallel
Strand 7	A	289	294	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	429	first strand
Strand 2	A	496	500	anti-parallel
Strand 3	A	485	492	anti-parallel
Strand 4	A	472	478	anti-parallel
Strand 5	A	514	517	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	70	first strand
Strand 2	C	202	210	anti-parallel
Strand 3	C	107	114	anti-parallel
Strand 4	C	158	162	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	79	84	first strand
Strand 2	C	181	186	anti-parallel
Strand 3	C	122	128	anti-parallel
Strand 4	C	147	151	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	172	first strand
Strand 2	C	102	104	anti-parallel
Strand 3	C	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	451	first strand
Strand 2	C	431	438	anti-parallel
Strand 3	C	251	254	anti-parallel
Strand 4	C	507	508	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	289	294	first strand
Strand 2	C	304	310	anti-parallel
Strand 3	C	373	378	anti-parallel
Strand 4	C	352	358	anti-parallel
Strand 5	C	332	341	anti-parallel
Strand 6	C	389	402	anti-parallel
Strand 7	C	289	294	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	427	429	first strand
Strand 2	C	496	500	anti-parallel
Strand 3	C	485	492	anti-parallel
Strand 4	C	472	478	anti-parallel
Strand 5	C	514	517	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6CRJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6CRJ