Analysis of interatomic Contacts of Structural Units in PDB entry:
6CRP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CRP entry

There are 4 chains in PDB entry 6CRP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 51ASN 296
B
 GLY 1GLN 247
C
 GLN 15ILE 246
D
 ASN 27ASP 44
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6CRP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 57Right-handed 310
Helix 2
AA2
A
58 64Right-handed alpha
Helix 3
AA3
A
100 108Right-handed alpha
Helix 4
AA4
B
43 48Right-handed alpha
Helix 5
AA5
B
62 66Right-handed 310
Helix 6
AA6
B
97 102Right-handed alpha
Helix 7
AA7
B
143 148Right-handed alpha
Helix 8
AA8
C
33 37Right-handed 310
Helix 9
AA9
C
56 61Right-handed alpha
Helix 10
AB1
C
83 87Right-handed 310
Helix 11
AB2
C
89 98Right-handed alpha
Helix 12
AB3
C
148 152Right-handed 310
Helix 13
AB4
C
157 161Right-handed 310
Helix 14
AB5
C
169 173Right-handed 310
Helix 15
AB6
C
200 204Right-handed 310
Helix 16
AB7
D
34 38Right-handed 310
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There are 11 sheets in PDB entry 6CRP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 76first strand
Strand 2
A
233 251anti-parallel
Strand 3
A
110 127anti-parallel
Strand 4
A
180 183anti-parallel
Strand 5
B
22 23parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 194first strand
Strand 2
A
110 127anti-parallel
Strand 3
A
233 251anti-parallel
Strand 4
B
39 40anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 91first strand
Strand 2
A
219 224anti-parallel
Strand 3
A
142 148anti-parallel
Strand 4
A
172 174anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 52first strand
Strand 2
B
210 218anti-parallel
Strand 3
B
68 71anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 52first strand
Strand 2
B
210 218anti-parallel
Strand 3
B
113 120anti-parallel
Strand 4
B
165 167anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 85first strand
Strand 2
B
191 201anti-parallel
Strand 3
B
126 134anti-parallel
Strand 4
B
154 156anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 109first strand
Strand 2
B
224 227anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 18first strand
Strand 2
C
21 23anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 65first strand
Strand 2
C
227 242anti-parallel
Strand 3
C
69 70anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 65first strand
Strand 2
C
227 242anti-parallel
Strand 3
C
99 111anti-parallel
Strand 4
C
185 190anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 82first strand
Strand 2
C
207 218anti-parallel
Strand 3
C
119 126anti-parallel
Strand 4
C
175 179anti-parallel
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