Analysis of interatomic Contacts of Structural Units in PDB entry:
6CRV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6CRV entry

There are 3 chains in PDB entry 6CRV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 18	TYR 1120
B	ARG 18	TYR 1120
C	ARG 18	TYR 1120

There are 48 helices in PDB entry 6CRV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	281	291	Right-handed alpha
Helix 2	AA2	A	602	612	Right-handed alpha
Helix 3	AA3	A	719	724	Right-handed alpha
Helix 4	AA4	A	728	735	Right-handed alpha
Helix 5	AA5	A	736	739	Right-handed 310
Helix 6	AA6	A	740	765	Right-handed alpha
Helix 7	AA7	A	798	805	Right-handed alpha
Helix 8	AA8	A	848	866	Right-handed alpha
Helix 9	AA9	A	867	871	Right-handed 310
Helix 10	AB1	A	879	890	Right-handed alpha
Helix 11	AB2	A	895	900	Right-handed alpha
Helix 12	AB3	A	901	923	Right-handed alpha
Helix 13	AB4	A	927	947	Right-handed alpha
Helix 14	AB5	A	948	950	Right-handed 310
Helix 15	AB6	A	958	966	Right-handed alpha
Helix 16	AB7	A	967	1013	Right-handed alpha
Helix 17	AB8	B	281	291	Right-handed alpha
Helix 18	AB9	B	602	612	Right-handed alpha
Helix 19	AC1	B	719	724	Right-handed alpha
Helix 20	AC2	B	728	735	Right-handed alpha
Helix 21	AC3	B	736	739	Right-handed 310
Helix 22	AC4	B	740	765	Right-handed alpha
Helix 23	AC5	B	798	805	Right-handed alpha
Helix 24	AC6	B	848	866	Right-handed alpha
Helix 25	AC7	B	867	871	Right-handed 310
Helix 26	AC8	B	879	890	Right-handed alpha
Helix 27	AC9	B	895	900	Right-handed alpha
Helix 28	AD1	B	901	923	Right-handed alpha
Helix 29	AD2	B	927	947	Right-handed alpha
Helix 30	AD3	B	948	950	Right-handed 310
Helix 31	AD4	B	958	966	Right-handed alpha
Helix 32	AD5	B	967	1013	Right-handed alpha
Helix 33	AD6	C	281	291	Right-handed alpha
Helix 34	AD7	C	602	612	Right-handed alpha
Helix 35	AD8	C	719	724	Right-handed alpha
Helix 36	AD9	C	728	735	Right-handed alpha
Helix 37	AE1	C	736	739	Right-handed 310
Helix 38	AE2	C	740	765	Right-handed alpha
Helix 39	AE3	C	798	805	Right-handed alpha
Helix 40	AE4	C	848	866	Right-handed alpha
Helix 41	AE5	C	867	871	Right-handed 310
Helix 42	AE6	C	879	890	Right-handed alpha
Helix 43	AE7	C	895	900	Right-handed alpha
Helix 44	AE8	C	901	923	Right-handed alpha
Helix 45	AE9	C	927	947	Right-handed alpha
Helix 46	AF1	C	948	950	Right-handed 310
Helix 47	AF2	C	958	966	Right-handed alpha
Helix 48	AF3	C	967	1013	Right-handed alpha

There are 45 sheets in PDB entry 6CRV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	35	first strand
Strand 2	A	64	72	anti-parallel
Strand 3	A	75	76	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	35	first strand
Strand 2	A	64	72	anti-parallel
Strand 3	A	250	256	anti-parallel
Strand 4	A	87	93	anti-parallel
Strand 5	A	179	190	anti-parallel
Strand 6	A	193	205	anti-parallel
Strand 7	A	217	223	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	C	551	553	parallel
Strand 3	C	559	563	anti-parallel
Strand 4	C	570	574	anti-parallel
Strand 5	C	532	540	anti-parallel
Strand 6	C	524	529	anti-parallel
Strand 7	C	312	314	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	59	first strand
Strand 2	A	258	266	anti-parallel
Strand 3	A	272	277	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	230	239	anti-parallel
Strand 3	A	100	104	anti-parallel
Strand 4	A	113	118	anti-parallel
Strand 5	A	123	141	anti-parallel
Strand 6	A	147	164	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	230	239	anti-parallel
Strand 3	A	123	141	parallel
Strand 4	A	147	164	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	615	616	first strand
Strand 2	A	298	307	anti-parallel
Strand 3	A	578	585	anti-parallel
Strand 4	A	595	599	anti-parallel
Strand 5	A	634	637	anti-parallel
Strand 6	A	628	631	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	314	first strand
Strand 2	A	524	529	parallel
Strand 3	A	532	540	anti-parallel
Strand 4	A	570	574	anti-parallel
Strand 5	A	559	563	anti-parallel
Strand 6	A	551	553	anti-parallel
Strand 7	B	46	47	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	640	646	first strand
Strand 2	A	673	679	parallel
Strand 3	A	656	661	anti-parallel
Strand 4	A	650	653	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	683	685	first strand
Strand 2	B	769	771	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	693	710	first strand
Strand 2	A	1041	1060	anti-parallel
Strand 3	A	1029	1038	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	693	710	first strand
Strand 2	A	1041	1060	anti-parallel
Strand 3	A	1076	1079	anti-parallel
Strand 4	A	1084	1087	anti-parallel
Strand 5	A	1095	1096	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	716	718	first strand
Strand 2	A	840	842	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	769	771	first strand
Strand 2	C	683	685	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	778	779	first strand
Strand 2	A	782	783	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	821	823	first strand
Strand 2	A	832	834	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1102	1107	first strand
Strand 2	A	1068	1072	anti-parallel
Strand 3	A	1062	1065	anti-parallel
Strand 4	A	1114	1116	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	35	first strand
Strand 2	B	64	72	anti-parallel
Strand 3	B	75	76	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	35	first strand
Strand 2	B	64	72	anti-parallel
Strand 3	B	250	256	anti-parallel
Strand 4	B	87	93	anti-parallel
Strand 5	B	179	190	anti-parallel
Strand 6	B	193	205	anti-parallel
Strand 7	B	217	223	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	59	first strand
Strand 2	B	258	266	anti-parallel
Strand 3	B	272	277	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	230	239	anti-parallel
Strand 3	B	100	104	anti-parallel
Strand 4	B	113	118	anti-parallel
Strand 5	B	123	141	anti-parallel
Strand 6	B	147	164	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	230	239	anti-parallel
Strand 3	B	123	141	parallel
Strand 4	B	147	164	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	615	616	first strand
Strand 2	B	298	307	anti-parallel
Strand 3	B	578	585	anti-parallel
Strand 4	B	595	599	anti-parallel
Strand 5	B	634	637	anti-parallel
Strand 6	B	628	631	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	312	314	first strand
Strand 2	B	524	529	parallel
Strand 3	B	532	540	anti-parallel
Strand 4	B	570	574	anti-parallel
Strand 5	B	559	563	anti-parallel
Strand 6	B	551	553	anti-parallel
Strand 7	C	46	47	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	640	646	first strand
Strand 2	B	673	679	parallel
Strand 3	B	656	661	anti-parallel
Strand 4	B	650	653	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	685	first strand
Strand 2	C	769	771	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	693	710	first strand
Strand 2	B	1041	1060	anti-parallel
Strand 3	B	1029	1038	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	693	710	first strand
Strand 2	B	1041	1060	anti-parallel
Strand 3	B	1076	1079	anti-parallel
Strand 4	B	1084	1087	anti-parallel
Strand 5	B	1095	1096	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	716	718	first strand
Strand 2	B	840	842	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	778	779	first strand
Strand 2	B	782	783	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	821	823	first strand
Strand 2	B	832	834	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1102	1107	first strand
Strand 2	B	1068	1072	anti-parallel
Strand 3	B	1062	1065	anti-parallel
Strand 4	B	1114	1116	parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	35	first strand
Strand 2	C	64	72	anti-parallel
Strand 3	C	75	76	anti-parallel

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There are 7 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	35	first strand
Strand 2	C	64	72	anti-parallel
Strand 3	C	250	256	anti-parallel
Strand 4	C	87	93	anti-parallel
Strand 5	C	179	190	anti-parallel
Strand 6	C	193	205	anti-parallel
Strand 7	C	217	223	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	59	first strand
Strand 2	C	258	266	anti-parallel
Strand 3	C	272	277	anti-parallel

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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	230	239	anti-parallel
Strand 3	C	100	104	anti-parallel
Strand 4	C	113	118	anti-parallel
Strand 5	C	123	141	anti-parallel
Strand 6	C	147	164	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	230	239	anti-parallel
Strand 3	C	123	141	parallel
Strand 4	C	147	164	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	615	616	first strand
Strand 2	C	298	307	anti-parallel
Strand 3	C	578	585	anti-parallel
Strand 4	C	595	599	anti-parallel
Strand 5	C	634	637	anti-parallel
Strand 6	C	628	631	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	640	646	first strand
Strand 2	C	673	679	parallel
Strand 3	C	656	661	anti-parallel
Strand 4	C	650	653	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	693	710	first strand
Strand 2	C	1041	1060	anti-parallel
Strand 3	C	1029	1038	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	693	710	first strand
Strand 2	C	1041	1060	anti-parallel
Strand 3	C	1076	1079	anti-parallel
Strand 4	C	1084	1087	anti-parallel
Strand 5	C	1095	1096	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	718	first strand
Strand 2	C	840	842	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	778	779	first strand
Strand 2	C	782	783	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	821	823	first strand
Strand 2	C	832	834	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1102	1107	first strand
Strand 2	C	1068	1072	anti-parallel
Strand 3	C	1062	1065	anti-parallel
Strand 4	C	1114	1116	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6CRV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6CRV