Analysis of interatomic Contacts of Structural Units in PDB entry:
6CSC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CSC entry

There are 2 chains in PDB entry 6CSC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLY 437
B
 THR 4GLY 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6CSC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 28Right-handed alpha
Helix 2
2
A
38 42Right-handed alpha
Helix 3
3
A
71 77Right-handed alpha
Helix 4
4
A
89 98Right-handed alpha
Helix 5
5
A
104 116Right-handed alpha
Helix 6
6
A
122 130Right-handed alpha
Helix 7
7
A
137 151Right-handed alpha
Helix 8
8
A
153 160Right-handed alpha
Helix 9
9
A
167 194Right-handed alpha
Helix 10
10
A
209 217Right-handed alpha
Helix 11
11
A
222 234Right-handed alpha
Helix 12
12
A
243 254Right-handed alpha
Helix 13
13
A
258 269Right-handed alpha
Helix 14
14
A
275 292Right-handed 310
Helix 15
15
A
298 310Right-handed alpha
Helix 16
16
A
328 340Right-handed alpha
Helix 17
17
A
345 364Right-handed alpha
Helix 18
18
A
374 376Right-handed 310
Helix 19
19
A
378 385Right-handed alpha
Helix 20
20
A
390 414Right-handed 310
Helix 21
21
A
427 434Right-handed alpha
Helix 22
22
B
6 28Right-handed alpha
Helix 23
23
B
38 42Right-handed alpha
Helix 24
24
B
71 77Right-handed alpha
Helix 25
25
B
89 98Right-handed alpha
Helix 26
26
B
104 117Right-handed alpha
Helix 27
27
B
122 130Right-handed alpha
Helix 28
28
B
137 151Right-handed alpha
Helix 29
29
B
153 160Right-handed alpha
Helix 30
30
B
164 194Right-handed 310
Helix 31
31
B
209 217Right-handed alpha
Helix 32
32
B
222 234Right-handed alpha
Helix 33
33
B
243 254Right-handed alpha
Helix 34
34
B
258 269Right-handed alpha
Helix 35
35
B
275 292Right-handed 310
Helix 36
36
B
298 309Right-handed alpha
Helix 37
37
B
328 340Right-handed alpha
Helix 38
38
B
345 363Right-handed alpha
Helix 39
39
B
374 385Right-handed 310
Helix 40
40
B
390 414Right-handed 310
Helix 41
41
B
427 434Right-handed alpha
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There are 2 sheets in PDB entry 6CSC. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
63 65anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 59first strand
Strand 2
B
63 66anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il