Analysis of interatomic Contacts of Structural Units in PDB entry:
6CTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CTF entry

There are 3 chains in PDB entry 6CTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 6GLU 416
B
 LYS 6GLU 416
C
 LYS 6GLU 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 6CTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 30Right-handed alpha
Helix 2
AA2
A
36 43Right-handed alpha
Helix 3
AA3
A
43 74Right-handed alpha
Helix 4
AA4
A
79 107Right-handed alpha
Helix 5
AA5
A
129 138Right-handed alpha
Helix 6
AA6
A
141 148Right-handed alpha
Helix 7
AA7
A
150 170Right-handed alpha
Helix 8
AA8
A
173 219Right-handed alpha
Helix 9
AA9
A
222 246Right-handed alpha
Helix 10
AB1
A
246 253Right-handed alpha
Helix 11
AB2
A
257 276Right-handed alpha
Helix 12
AB3
A
281 292Right-handed alpha
Helix 13
AB4
A
295 300Right-handed alpha
Helix 14
AB5
A
302 309Right-handed alpha
Helix 15
AB6
A
311 330Right-handed alpha
Helix 16
AB7
A
337 352Right-handed alpha
Helix 17
AB8
A
358 369Right-handed alpha
Helix 18
AB9
A
370 372Right-handed 310
Helix 19
AC1
A
376 389Right-handed alpha
Helix 20
AC2
A
389 416Right-handed alpha
Helix 21
AC3
B
11 30Right-handed alpha
Helix 22
AC4
B
36 43Right-handed alpha
Helix 23
AC5
B
43 74Right-handed alpha
Helix 24
AC6
B
79 107Right-handed alpha
Helix 25
AC7
B
129 138Right-handed alpha
Helix 26
AC8
B
141 148Right-handed alpha
Helix 27
AC9
B
150 170Right-handed alpha
Helix 28
AD1
B
173 219Right-handed alpha
Helix 29
AD2
B
222 246Right-handed alpha
Helix 30
AD3
B
246 253Right-handed alpha
Helix 31
AD4
B
257 276Right-handed alpha
Helix 32
AD5
B
281 292Right-handed alpha
Helix 33
AD6
B
295 307Right-handed alpha
Helix 34
AD7
B
311 330Right-handed alpha
Helix 35
AD8
B
337 352Right-handed alpha
Helix 36
AD9
B
358 369Right-handed alpha
Helix 37
AE1
B
370 372Right-handed 310
Helix 38
AE2
B
376 389Right-handed alpha
Helix 39
AE3
B
389 416Right-handed alpha
Helix 40
AE4
C
11 30Right-handed alpha
Helix 41
AE5
C
36 43Right-handed alpha
Helix 42
AE6
C
43 74Right-handed alpha
Helix 43
AE7
C
79 107Right-handed alpha
Helix 44
AE8
C
129 137Right-handed alpha
Helix 45
AE9
C
141 148Right-handed alpha
Helix 46
AF1
C
150 170Right-handed alpha
Helix 47
AF2
C
173 219Right-handed alpha
Helix 48
AF3
C
222 246Right-handed alpha
Helix 49
AF4
C
246 253Right-handed alpha
Helix 50
AF5
C
257 276Right-handed alpha
Helix 51
AF6
C
281 292Right-handed alpha
Helix 52
AF7
C
295 309Right-handed alpha
Helix 53
AF8
C
311 330Right-handed alpha
Helix 54
AF9
C
337 352Right-handed alpha
Helix 55
AG1
C
358 369Right-handed alpha
Helix 56
AG2
C
370 372Right-handed 310
Helix 57
AG3
C
376 389Right-handed alpha
Helix 58
AG4
C
389 416Right-handed alpha
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There are no sheets in PDB entry 6CTF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il