Analysis of interatomic Contacts of Structural Units in PDB entry:
6CUD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CUD entry

There are 4 chains in PDB entry 6CUD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 22LEU 806
B
 THR 22LEU 806
C
 THR 22LEU 806
D
 THR 22LEU 806
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are164 helices in PDB entry 6CUD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 38Right-handed alpha
Helix 2
AA2
A
39 50Right-handed alpha
Helix 3
AA3
A
64 72Right-handed alpha
Helix 4
AA4
A
74 82Right-handed alpha
Helix 5
AA5
A
91 100Right-handed alpha
Helix 6
AA6
A
103 111Right-handed alpha
Helix 7
AA7
A
112 117Right-handed alpha
Helix 8
AA8
A
150 159Right-handed alpha
Helix 9
AA9
A
160 171Right-handed alpha
Helix 10
AB1
A
184 193Right-handed alpha
Helix 11
AB2
A
194 210Right-handed alpha
Helix 12
AB3
A
211 219Right-handed alpha
Helix 13
AB4
A
221 241Right-handed alpha
Helix 14
AB5
A
243 264Right-handed alpha
Helix 15
AB6
A
267 275Right-handed alpha
Helix 16
AB7
A
294 303Right-handed alpha
Helix 17
AB8
A
305 310Right-handed alpha
Helix 18
AB9
A
311 323Right-handed alpha
Helix 19
AC1
A
328 332Right-handed 310
Helix 20
AC2
A
333 347Right-handed alpha
Helix 21
AC3
A
350 357Right-handed alpha
Helix 22
AC4
A
358 360Right-handed 310
Helix 23
AC5
A
361 366Right-handed alpha
Helix 24
AC6
A
369 392Right-handed alpha
Helix 25
AC7
A
414 421Right-handed alpha
Helix 26
AC8
A
423 448Right-handed alpha
Helix 27
AC9
A
448 455Right-handed alpha
Helix 28
AD1
A
455 493Right-handed alpha
Helix 29
AD2
A
504 509Right-handed alpha
Helix 30
AD3
A
510 512Right-handed 310
Helix 31
AD4
A
521 537Right-handed alpha
Helix 32
AD5
A
538 544Right-handed 310
Helix 33
AD6
A
551 587Right-handed alpha
Helix 34
AD7
A
588 590Right-handed 310
Helix 35
AD8
A
601 612Right-handed alpha
Helix 36
AD9
A
613 615Right-handed 310
Helix 37
AE1
A
618 622Right-handed 310
Helix 38
AE2
A
628 665Right-handed alpha
Helix 39
AE3
A
668 686Right-handed alpha
Helix 40
AE4
A
761 786Right-handed alpha
Helix 41
AE5
A
787 806Right-handed alpha
Helix 42
AE6
B
25 38Right-handed alpha
Helix 43
AE7
B
39 50Right-handed alpha
Helix 44
AE8
B
64 72Right-handed alpha
Helix 45
AE9
B
74 82Right-handed alpha
Helix 46
AF1
B
91 100Right-handed alpha
Helix 47
AF2
B
103 111Right-handed alpha
Helix 48
AF3
B
112 117Right-handed alpha
Helix 49
AF4
B
150 159Right-handed alpha
Helix 50
AF5
B
160 171Right-handed alpha
Helix 51
AF6
B
184 193Right-handed alpha
Helix 52
AF7
B
194 210Right-handed alpha
Helix 53
AF8
B
211 219Right-handed alpha
Helix 54
AF9
B
221 241Right-handed alpha
Helix 55
AG1
B
243 264Right-handed alpha
Helix 56
AG2
B
267 275Right-handed alpha
Helix 57
AG3
B
294 303Right-handed alpha
Helix 58
AG4
B
305 310Right-handed alpha
Helix 59
AG5
B
311 323Right-handed alpha
Helix 60
AG6
B
328 332Right-handed 310
Helix 61
AG7
B
333 347Right-handed alpha
Helix 62
AG8
B
350 357Right-handed alpha
Helix 63
AG9
B
358 360Right-handed 310
Helix 64
AH1
B
361 366Right-handed alpha
Helix 65
AH2
B
369 392Right-handed alpha
Helix 66
AH3
B
414 421Right-handed alpha
Helix 67
AH4
B
423 448Right-handed alpha
Helix 68
AH5
B
448 455Right-handed alpha
Helix 69
AH6
B
455 493Right-handed alpha
Helix 70
AH7
B
504 509Right-handed alpha
Helix 71
AH8
B
510 512Right-handed 310
Helix 72
AH9
B
521 537Right-handed alpha
Helix 73
AI1
B
538 544Right-handed 310
Helix 74
AI2
B
551 587Right-handed alpha
Helix 75
AI3
B
588 590Right-handed 310
Helix 76
AI4
B
601 612Right-handed alpha
Helix 77
AI5
B
613 615Right-handed 310
Helix 78
AI6
B
618 622Right-handed 310
Helix 79
AI7
B
628 665Right-handed alpha
Helix 80
AI8
B
668 685Right-handed alpha
Helix 81
AI9
B
761 786Right-handed alpha
Helix 82
AJ1
B
787 806Right-handed alpha
Helix 83
AJ2
C
25 38Right-handed alpha
Helix 84
AJ3
C
39 50Right-handed alpha
Helix 85
AJ4
C
64 72Right-handed alpha
Helix 86
AJ5
C
74 82Right-handed alpha
Helix 87
AJ6
C
91 100Right-handed alpha
Helix 88
AJ7
C
103 111Right-handed alpha
Helix 89
AJ8
C
112 117Right-handed alpha
Helix 90
AJ9
C
150 159Right-handed alpha
Helix 91
AK1
C
160 171Right-handed alpha
Helix 92
AK2
C
184 193Right-handed alpha
Helix 93
AK3
C
194 210Right-handed alpha
Helix 94
AK4
C
211 219Right-handed alpha
Helix 95
AK5
C
221 241Right-handed alpha
Helix 96
AK6
C
243 264Right-handed alpha
Helix 97
AK7
C
267 275Right-handed alpha
Helix 98
AK8
C
294 303Right-handed alpha
Helix 99
AK9
C
305 310Right-handed alpha
Helix 100
AL1
C
311 323Right-handed alpha
Helix 101
AL2
C
328 332Right-handed 310
Helix 102
AL3
C
333 347Right-handed alpha
Helix 103
AL4
C
350 357Right-handed alpha
Helix 104
AL5
C
358 360Right-handed 310
Helix 105
AL6
C
361 366Right-handed alpha
Helix 106
AL7
C
369 392Right-handed alpha
Helix 107
AL8
C
414 421Right-handed alpha
Helix 108
AL9
C
423 448Right-handed alpha
Helix 109
AM1
C
448 455Right-handed alpha
Helix 110
AM2
C
455 493Right-handed alpha
Helix 111
AM3
C
504 509Right-handed alpha
Helix 112
AM4
C
510 512Right-handed 310
Helix 113
AM5
C
521 537Right-handed alpha
Helix 114
AM6
C
538 544Right-handed 310
Helix 115
AM7
C
551 587Right-handed alpha
Helix 116
AM8
C
588 590Right-handed 310
Helix 117
AM9
C
601 612Right-handed alpha
Helix 118
AN1
C
613 615Right-handed 310
Helix 119
AN2
C
618 622Right-handed 310
Helix 120
AN3
C
628 665Right-handed alpha
Helix 121
AN4
C
668 686Right-handed alpha
Helix 122
AN5
C
761 786Right-handed alpha
Helix 123
AN6
C
787 806Right-handed alpha
Helix 124
AN7
D
25 38Right-handed alpha
Helix 125
AN8
D
39 50Right-handed alpha
Helix 126
AN9
D
64 72Right-handed alpha
Helix 127
AO1
D
74 82Right-handed alpha
Helix 128
AO2
D
91 100Right-handed alpha
Helix 129
AO3
D
103 111Right-handed alpha
Helix 130
AO4
D
112 117Right-handed alpha
Helix 131
AO5
D
150 159Right-handed alpha
Helix 132
AO6
D
160 171Right-handed alpha
Helix 133
AO7
D
184 193Right-handed alpha
Helix 134
AO8
D
194 210Right-handed alpha
Helix 135
AO9
D
211 219Right-handed alpha
Helix 136
AP1
D
221 241Right-handed alpha
Helix 137
AP2
D
243 264Right-handed alpha
Helix 138
AP3
D
267 275Right-handed alpha
Helix 139
AP4
D
294 303Right-handed alpha
Helix 140
AP5
D
305 310Right-handed alpha
Helix 141
AP6
D
311 323Right-handed alpha
Helix 142
AP7
D
328 332Right-handed 310
Helix 143
AP8
D
333 347Right-handed alpha
Helix 144
AP9
D
350 357Right-handed alpha
Helix 145
AQ1
D
358 360Right-handed 310
Helix 146
AQ2
D
361 366Right-handed alpha
Helix 147
AQ3
D
369 392Right-handed alpha
Helix 148
AQ4
D
414 421Right-handed alpha
Helix 149
AQ5
D
423 448Right-handed alpha
Helix 150
AQ6
D
448 455Right-handed alpha
Helix 151
AQ7
D
455 493Right-handed alpha
Helix 152
AQ8
D
504 509Right-handed alpha
Helix 153
AQ9
D
510 512Right-handed 310
Helix 154
AR1
D
521 537Right-handed alpha
Helix 155
AR2
D
538 544Right-handed 310
Helix 156
AR3
D
551 587Right-handed alpha
Helix 157
AR4
D
588 590Right-handed 310
Helix 158
AR5
D
601 612Right-handed alpha
Helix 159
AR6
D
613 615Right-handed 310
Helix 160
AR7
D
618 622Right-handed 310
Helix 161
AR8
D
628 665Right-handed alpha
Helix 162
AR9
D
668 686Right-handed alpha
Helix 163
AS1
D
761 786Right-handed alpha
Helix 164
AS2
D
787 806Right-handed alpha
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