Analysis of interatomic Contacts of Structural Units in PDB entry:
6CV0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6CV0 entry

There are 3 chains in PDB entry 6CV0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 21	VAL 1022
B	TYR 21	VAL 1022
C	TYR 21	VAL 1022

There are 48 helices in PDB entry 6CV0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	163	165	Right-handed 310
Helix 2	AA2	A	224	234	Right-handed alpha
Helix 3	AA3	A	332	336	Right-handed 310
Helix 4	AA4	A	356	362	Right-handed alpha
Helix 5	AA5	A	468	470	Right-handed 310
Helix 6	AA6	A	609	615	Right-handed alpha
Helix 7	AA7	A	621	626	Right-handed alpha
Helix 8	AA8	A	628	658	Right-handed alpha
Helix 9	AA9	A	692	699	Right-handed alpha
Helix 10	AB1	A	723	725	Right-handed 310
Helix 11	AB2	A	726	732	Right-handed alpha
Helix 12	AB3	A	749	761	Right-handed alpha
Helix 13	AB4	A	771	780	Right-handed alpha
Helix 14	AB5	A	793	811	Right-handed alpha
Helix 15	AB6	A	816	833	Right-handed alpha
Helix 16	AB7	A	858	906	Right-handed alpha
Helix 17	AB8	B	163	165	Right-handed 310
Helix 18	AB9	B	224	234	Right-handed alpha
Helix 19	AC1	B	332	336	Right-handed 310
Helix 20	AC2	B	356	362	Right-handed alpha
Helix 21	AC3	B	468	470	Right-handed 310
Helix 22	AC4	B	609	615	Right-handed alpha
Helix 23	AC5	B	621	626	Right-handed alpha
Helix 24	AC6	B	628	658	Right-handed alpha
Helix 25	AC7	B	692	699	Right-handed alpha
Helix 26	AC8	B	723	725	Right-handed 310
Helix 27	AC9	B	726	732	Right-handed alpha
Helix 28	AD1	B	749	761	Right-handed alpha
Helix 29	AD2	B	771	780	Right-handed alpha
Helix 30	AD3	B	793	811	Right-handed alpha
Helix 31	AD4	B	816	833	Right-handed alpha
Helix 32	AD5	B	858	906	Right-handed alpha
Helix 33	AD6	C	163	165	Right-handed 310
Helix 34	AD7	C	224	234	Right-handed alpha
Helix 35	AD8	C	332	336	Right-handed 310
Helix 36	AD9	C	356	362	Right-handed alpha
Helix 37	AE1	C	468	470	Right-handed 310
Helix 38	AE2	C	609	615	Right-handed alpha
Helix 39	AE3	C	621	626	Right-handed alpha
Helix 40	AE4	C	628	658	Right-handed alpha
Helix 41	AE5	C	692	699	Right-handed alpha
Helix 42	AE6	C	723	725	Right-handed 310
Helix 43	AE7	C	726	732	Right-handed alpha
Helix 44	AE8	C	749	761	Right-handed alpha
Helix 45	AE9	C	771	780	Right-handed alpha
Helix 46	AF1	C	793	811	Right-handed alpha
Helix 47	AF2	C	816	833	Right-handed alpha
Helix 48	AF3	C	858	906	Right-handed alpha

There are 42 sheets in PDB entry 6CV0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	45	first strand
Strand 2	A	204	211	anti-parallel
Strand 3	A	214	220	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	55	first strand
Strand 2	A	196	200	anti-parallel
Strand 3	A	80	84	anti-parallel
Strand 4	A	157	161	anti-parallel
Strand 5	A	167	169	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	78	first strand
Strand 2	A	183	187	anti-parallel
Strand 3	A	101	103	anti-parallel
Strand 4	A	108	110	anti-parallel
Strand 5	A	133	136	anti-parallel
Strand 6	A	141	145	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	245	first strand
Strand 2	A	496	501	anti-parallel
Strand 3	A	504	510	anti-parallel
Strand 4	A	524	525	anti-parallel
Strand 5	A	518	519	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	255	257	first strand
Strand 2	A	432	436	parallel
Strand 3	A	439	447	anti-parallel
Strand 4	A	484	490	anti-parallel
Strand 5	A	472	477	anti-parallel
Strand 6	A	465	466	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	273	first strand
Strand 2	A	301	306	parallel
Strand 3	A	404	411	parallel
Strand 4	A	340	344	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	314	315	first strand
Strand 2	A	373	374	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	350	first strand
Strand 2	A	398	401	anti-parallel
Strand 3	A	369	370	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	554	556	first strand
Strand 2	A	562	564	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	584	587	first strand
Strand 2	A	945	948	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	594	600	first strand
Strand 2	A	932	938	anti-parallel
Strand 3	A	924	928	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	605	608	first strand
Strand 2	A	735	738	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	965	966	first strand
Strand 2	A	1002	1003	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	975	978	first strand
Strand 2	A	981	984	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	45	first strand
Strand 2	B	204	211	anti-parallel
Strand 3	B	214	220	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	55	first strand
Strand 2	B	196	200	anti-parallel
Strand 3	B	80	84	anti-parallel
Strand 4	B	157	161	anti-parallel
Strand 5	B	167	169	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	78	first strand
Strand 2	B	183	187	anti-parallel
Strand 3	B	101	103	anti-parallel
Strand 4	B	108	110	anti-parallel
Strand 5	B	133	136	anti-parallel
Strand 6	B	141	145	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	245	first strand
Strand 2	B	496	501	anti-parallel
Strand 3	B	504	510	anti-parallel
Strand 4	B	524	525	anti-parallel
Strand 5	B	518	519	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	255	257	first strand
Strand 2	B	432	436	parallel
Strand 3	B	439	447	anti-parallel
Strand 4	B	484	490	anti-parallel
Strand 5	B	472	477	anti-parallel
Strand 6	B	465	466	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	273	first strand
Strand 2	B	301	306	parallel
Strand 3	B	404	411	parallel
Strand 4	B	340	344	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	314	315	first strand
Strand 2	B	373	374	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	350	first strand
Strand 2	B	398	401	anti-parallel
Strand 3	B	369	370	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	554	556	first strand
Strand 2	B	562	564	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	584	587	first strand
Strand 2	B	945	948	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	594	600	first strand
Strand 2	B	932	938	anti-parallel
Strand 3	B	924	928	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	605	608	first strand
Strand 2	B	735	738	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	965	966	first strand
Strand 2	B	1002	1003	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	975	978	first strand
Strand 2	B	981	984	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	45	first strand
Strand 2	C	204	211	anti-parallel
Strand 3	C	214	220	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	55	first strand
Strand 2	C	196	200	anti-parallel
Strand 3	C	80	84	anti-parallel
Strand 4	C	157	161	anti-parallel
Strand 5	C	167	169	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	78	first strand
Strand 2	C	183	187	anti-parallel
Strand 3	C	101	103	anti-parallel
Strand 4	C	108	110	anti-parallel
Strand 5	C	133	136	anti-parallel
Strand 6	C	141	145	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	245	first strand
Strand 2	C	496	501	anti-parallel
Strand 3	C	504	510	anti-parallel
Strand 4	C	524	525	anti-parallel
Strand 5	C	518	519	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	255	257	first strand
Strand 2	C	432	436	parallel
Strand 3	C	439	447	anti-parallel
Strand 4	C	484	490	anti-parallel
Strand 5	C	472	477	anti-parallel
Strand 6	C	465	466	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	270	273	first strand
Strand 2	C	301	306	parallel
Strand 3	C	404	411	parallel
Strand 4	C	340	344	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	314	315	first strand
Strand 2	C	373	374	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	350	first strand
Strand 2	C	398	401	anti-parallel
Strand 3	C	369	370	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	554	556	first strand
Strand 2	C	562	564	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	584	587	first strand
Strand 2	C	945	948	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	594	600	first strand
Strand 2	C	932	938	anti-parallel
Strand 3	C	924	928	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	605	608	first strand
Strand 2	C	735	738	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	965	966	first strand
Strand 2	C	1002	1003	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	975	978	first strand
Strand 2	C	981	984	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6CV0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6CV0