Analysis of interatomic Contacts of Structural Units in PDB entry:
6CV3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CV3 entry

There are 3 chains in PDB entry 6CV3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 53THR 289
B
 GLY 1TYR 246
C
 LYS 17LEU 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6CV3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 64Right-handed alpha
Helix 2
AA2
A
100 108Right-handed alpha
Helix 3
AA3
A
161 165Right-handed 310
Helix 4
AA4
B
43 48Right-handed alpha
Helix 5
AA5
B
62 66Right-handed 310
Helix 6
AA6
B
98 103Right-handed alpha
Helix 7
AA7
C
89 98Right-handed alpha
Helix 8
AA8
C
142 147Right-handed alpha
Helix 9
AA9
C
148 152Right-handed 310
Helix 10
AB1
C
157 161Right-handed 310
Helix 11
AB2
C
169 173Right-handed 310
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There are 11 sheets in PDB entry 6CV3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 74first strand
Strand 2
A
233 242anti-parallel
Strand 3
A
126 127anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 74first strand
Strand 2
A
233 242anti-parallel
Strand 3
A
117 123anti-parallel
Strand 4
A
182 184anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
218 224anti-parallel
Strand 3
A
142 148anti-parallel
Strand 4
A
172 174anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 194first strand
Strand 2
A
110 113anti-parallel
Strand 3
A
248 251anti-parallel
Strand 4
B
39 40anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 52first strand
Strand 2
B
209 218anti-parallel
Strand 3
B
68 72anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 52first strand
Strand 2
B
209 218anti-parallel
Strand 3
B
113 119anti-parallel
Strand 4
B
162 166anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 85first strand
Strand 2
B
191 196anti-parallel
Strand 3
B
128 134anti-parallel
Strand 4
B
151 156anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 110first strand
Strand 2
B
223 227anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 65first strand
Strand 2
C
226 240anti-parallel
Strand 3
C
69 71anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 65first strand
Strand 2
C
226 240anti-parallel
Strand 3
C
101 112anti-parallel
Strand 4
C
185 190anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 80first strand
Strand 2
C
209 218anti-parallel
Strand 3
C
119 126anti-parallel
Strand 4
C
175 179anti-parallel
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