Analysis of interatomic Contacts of Structural Units in PDB entry:
6CVZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6CVZ entry

There are 3 chains in PDB entry 6CVZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 433	GLU 774
B	HIS 434	GLU 774
C	HIS 434	GLU 774

There are no helices in PDB entry 6CVZ

There are 21 sheets in PDB entry 6CVZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	435	443	first strand
Strand 2	A	767	774	anti-parallel
Strand 3	A	757	763	anti-parallel
Strand 4	A	748	754	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	453	456	first strand
Strand 2	A	461	467	anti-parallel
Strand 3	A	477	483	anti-parallel
Strand 4	A	491	496	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	500	505	first strand
Strand 2	A	512	517	anti-parallel
Strand 3	A	521	526	anti-parallel
Strand 4	A	531	537	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	547	first strand
Strand 2	A	554	559	anti-parallel
Strand 3	A	564	568	anti-parallel
Strand 4	A	577	579	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	588	594	first strand
Strand 2	A	606	611	anti-parallel
Strand 3	A	614	620	anti-parallel
Strand 4	A	626	630	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	635	644	first strand
Strand 2	A	649	656	anti-parallel
Strand 3	A	664	674	anti-parallel
Strand 4	A	680	691	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	703	706	first strand
Strand 2	A	714	718	anti-parallel
Strand 3	A	725	730	anti-parallel
Strand 4	A	736	741	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	435	443	first strand
Strand 2	B	767	774	anti-parallel
Strand 3	B	757	763	anti-parallel
Strand 4	B	748	754	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	453	456	first strand
Strand 2	B	461	467	anti-parallel
Strand 3	B	477	483	anti-parallel
Strand 4	B	492	496	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	505	first strand
Strand 2	B	512	517	anti-parallel
Strand 3	B	521	526	anti-parallel
Strand 4	B	531	537	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	542	547	first strand
Strand 2	B	554	559	anti-parallel
Strand 3	B	564	568	anti-parallel
Strand 4	B	577	579	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	588	594	first strand
Strand 2	B	606	611	anti-parallel
Strand 3	B	615	620	anti-parallel
Strand 4	B	626	630	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	635	644	first strand
Strand 2	B	649	656	anti-parallel
Strand 3	B	664	674	anti-parallel
Strand 4	B	680	691	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	703	706	first strand
Strand 2	B	714	718	anti-parallel
Strand 3	B	725	730	anti-parallel
Strand 4	B	736	741	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	435	443	first strand
Strand 2	C	767	774	anti-parallel
Strand 3	C	757	763	anti-parallel
Strand 4	C	748	754	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	453	456	first strand
Strand 2	C	461	467	anti-parallel
Strand 3	C	477	483	anti-parallel
Strand 4	C	489	496	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	500	505	first strand
Strand 2	C	512	517	anti-parallel
Strand 3	C	521	526	anti-parallel
Strand 4	C	531	537	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	542	547	first strand
Strand 2	C	554	559	anti-parallel
Strand 3	C	564	568	anti-parallel
Strand 4	C	577	579	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	588	594	first strand
Strand 2	C	606	611	anti-parallel
Strand 3	C	615	620	anti-parallel
Strand 4	C	626	630	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	635	644	first strand
Strand 2	C	649	656	anti-parallel
Strand 3	C	664	674	anti-parallel
Strand 4	C	680	691	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	703	706	first strand
Strand 2	C	714	719	anti-parallel
Strand 3	C	725	730	anti-parallel
Strand 4	C	736	741	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6CVZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6CVZ