Analysis of interatomic Contacts of Structural Units in PDB entry:
6CW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CW5 entry

There is 1 chain in PDB entry 6CW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4ASN 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6CW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 54Right-handed alpha
Helix 2
AA2
A
68 78Right-handed alpha
Helix 3
AA3
A
112 117Right-handed 310
Helix 4
AA4
A
140 154Right-handed alpha
Helix 5
AA5
A
169 176Right-handed alpha
Helix 6
AA6
A
177 181Right-handed 310
Helix 7
AA7
A
188 198Right-handed alpha
Helix 8
AA8
A
203 207Right-handed 310
Helix 9
AA9
A
211 226Right-handed alpha
Helix 10
AB1
A
240 242Right-handed 310
Helix 11
AB2
A
270 285Right-handed alpha
Helix 12
AB3
A
288 304Right-handed alpha
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There are 2 sheets in PDB entry 6CW5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 88first strand
Strand 2
A
58 65parallel
Strand 3
A
7 10parallel
Strand 4
A
132 135parallel
Strand 5
A
159 162parallel
Strand 6
A
183 187parallel
Strand 7
A
234 238parallel
Strand 8
A
244 247anti-parallel
Strand 9
A
254 256anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 41first strand
Strand 2
A
14 21anti-parallel
Strand 3
A
94 101parallel
Strand 4
A
107 111anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il