Analysis of interatomic Contacts of Structural Units in PDB entry:
6CX6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CX6 entry

There are 2 chains in PDB entry 6CX6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 42SER 371
B
 LEU 39SER 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6CX6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 60Right-handed alpha
Helix 2
AA2
A
62 68Right-handed alpha
Helix 3
AA3
A
95 106Right-handed alpha
Helix 4
AA4
A
117 127Right-handed alpha
Helix 5
AA5
A
127 133Right-handed alpha
Helix 6
AA6
A
175 179Right-handed 310
Helix 7
AA7
A
181 192Right-handed alpha
Helix 8
AA8
A
211 217Right-handed alpha
Helix 9
AA9
A
217 223Right-handed alpha
Helix 10
AB1
A
231 241Right-handed alpha
Helix 11
AB2
A
258 263Right-handed alpha
Helix 12
AB3
A
321 331Right-handed alpha
Helix 13
AB4
A
332 335Right-handed 310
Helix 14
AB5
A
354 359Right-handed alpha
Helix 15
AB6
A
361 369Right-handed alpha
Helix 16
AB7
B
51 56Right-handed alpha
Helix 17
AB8
B
62 67Right-handed alpha
Helix 18
AB9
B
95 106Right-handed alpha
Helix 19
AC1
B
117 127Right-handed alpha
Helix 20
AC2
B
127 137Right-handed alpha
Helix 21
AC3
B
181 192Right-handed alpha
Helix 22
AC4
B
211 217Right-handed alpha
Helix 23
AC5
B
217 223Right-handed alpha
Helix 24
AC6
B
231 241Right-handed alpha
Helix 25
AC7
B
258 265Right-handed alpha
Helix 26
AC8
B
321 331Right-handed alpha
Helix 27
AC9
B
333 335Right-handed 310
Helix 28
AD1
B
354 360Right-handed alpha
Helix 29
AD2
B
361 370Right-handed alpha
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There are 8 sheets in PDB entry 6CX6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 148first strand
Strand 2
A
110 115parallel
Strand 3
A
86 90parallel
Strand 4
A
167 172parallel
Strand 5
A
193 206parallel
Strand 6
A
229 230parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 148first strand
Strand 2
A
110 115parallel
Strand 3
A
86 90parallel
Strand 4
A
167 172parallel
Strand 5
A
193 206parallel
Strand 6
A
271 278anti-parallel
Strand 7
A
246 253anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 319first strand
Strand 2
A
293 296anti-parallel
Strand 3
A
337 339anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 305first strand
Strand 2
A
311 313anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 148first strand
Strand 2
B
112 115parallel
Strand 3
B
87 90parallel
Strand 4
B
167 171parallel
Strand 5
B
193 206parallel
Strand 6
B
229 230parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 148first strand
Strand 2
B
112 115parallel
Strand 3
B
87 90parallel
Strand 4
B
167 171parallel
Strand 5
B
193 206parallel
Strand 6
B
270 278anti-parallel
Strand 7
B
246 254anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
317 320first strand
Strand 2
B
292 296anti-parallel
Strand 3
B
337 339anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
303 305first strand
Strand 2
B
311 313anti-parallel
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