Analysis of interatomic Contacts of Structural Units in PDB entry:
6CY5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CY5 entry

There are 2 chains in PDB entry 6CY5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 318
B
 MET 1ARG 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6CY5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 21Right-handed alpha
Helix 2
AA2
A
21 36Right-handed alpha
Helix 3
AA3
A
43 57Right-handed alpha
Helix 4
AA4
A
60 79Right-handed alpha
Helix 5
AA5
A
82 84Right-handed 310
Helix 6
AA6
A
85 99Right-handed alpha
Helix 7
AA7
A
127 142Right-handed alpha
Helix 8
AA8
A
155 170Right-handed alpha
Helix 9
AA9
A
181 196Right-handed alpha
Helix 10
AB1
A
211 228Right-handed alpha
Helix 11
AB2
A
246 260Right-handed alpha
Helix 12
AB3
A
277 286Right-handed alpha
Helix 13
AB4
A
306 316Right-handed alpha
Helix 14
AB5
B
10 21Right-handed alpha
Helix 15
AB6
B
21 36Right-handed alpha
Helix 16
AB7
B
43 57Right-handed alpha
Helix 17
AB8
B
60 79Right-handed alpha
Helix 18
AB9
B
82 84Right-handed 310
Helix 19
AC1
B
85 99Right-handed alpha
Helix 20
AC2
B
127 142Right-handed alpha
Helix 21
AC3
B
155 170Right-handed alpha
Helix 22
AC4
B
181 196Right-handed alpha
Helix 23
AC5
B
211 228Right-handed alpha
Helix 24
AC6
B
246 260Right-handed alpha
Helix 25
AC7
B
277 286Right-handed alpha
Helix 26
AC8
B
306 316Right-handed alpha
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There are 2 sheets in PDB entry 6CY5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 174first strand
Strand 2
A
146 151parallel
Strand 3
A
200 205parallel
Strand 4
A
116 121parallel
Strand 5
A
236 242parallel
Strand 6
A
264 268parallel
Strand 7
A
290 294parallel
Strand 8
A
302 304anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 174first strand
Strand 2
B
146 151parallel
Strand 3
B
200 205parallel
Strand 4
B
116 121parallel
Strand 5
B
236 242parallel
Strand 6
B
264 268parallel
Strand 7
B
290 294parallel
Strand 8
B
302 304anti-parallel
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