Analysis of interatomic Contacts of Structural Units in PDB entry:
6CYD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CYD entry

There are 2 chains in PDB entry 6CYD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 565LEU 916
B
 LEU 562LEU 916
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 6CYD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
583 589Right-handed alpha
Helix 2
AA2
A
592 597Right-handed alpha
Helix 3
AA3
A
606 610Right-handed 310
Helix 4
AA4
A
611 613Right-handed 310
Helix 5
AA5
A
614 626Right-handed alpha
Helix 6
AA6
A
627 632Right-handed alpha
Helix 7
AA7
A
635 649Right-handed alpha
Helix 8
AA8
A
657 676Right-handed alpha
Helix 9
AA9
A
677 680Right-handed 310
Helix 10
AB1
A
682 696Right-handed alpha
Helix 11
AB2
A
704 711Right-handed alpha
Helix 12
AB3
A
713 720Right-handed alpha
Helix 13
AB4
A
724 739Right-handed alpha
Helix 14
AB5
A
750 767Right-handed alpha
Helix 15
AB6
A
769 787Right-handed alpha
Helix 16
AB7
A
792 809Right-handed alpha
Helix 17
AB8
A
810 814Right-handed 310
Helix 18
AB9
A
815 840Right-handed alpha
Helix 19
AC1
A
845 849Right-handed 310
Helix 20
AC2
A
854 866Right-handed alpha
Helix 21
AC3
A
866 878Right-handed alpha
Helix 22
AC4
A
881 902Right-handed alpha
Helix 23
AC5
B
562 566Right-handed 310
Helix 24
AC6
B
582 587Right-handed alpha
Helix 25
AC7
B
592 597Right-handed alpha
Helix 26
AC8
B
606 610Right-handed 310
Helix 27
AC9
B
611 613Right-handed 310
Helix 28
AD1
B
614 626Right-handed alpha
Helix 29
AD2
B
627 633Right-handed alpha
Helix 30
AD3
B
635 649Right-handed alpha
Helix 31
AD4
B
657 676Right-handed alpha
Helix 32
AD5
B
677 680Right-handed 310
Helix 33
AD6
B
682 696Right-handed alpha
Helix 34
AD7
B
704 711Right-handed alpha
Helix 35
AD8
B
713 720Right-handed alpha
Helix 36
AD9
B
721 723Right-handed 310
Helix 37
AE1
B
724 739Right-handed alpha
Helix 38
AE2
B
750 767Right-handed alpha
Helix 39
AE3
B
769 787Right-handed alpha
Helix 40
AE4
B
792 809Right-handed alpha
Helix 41
AE5
B
810 814Right-handed 310
Helix 42
AE6
B
815 840Right-handed alpha
Helix 43
AE7
B
845 849Right-handed 310
Helix 44
AE8
B
854 866Right-handed alpha
Helix 45
AE9
B
866 878Right-handed alpha
Helix 46
AF1
B
881 900Right-handed alpha
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There are no sheets in PDB entry 6CYD
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