Analysis of interatomic Contacts of Structural Units in PDB entry:
6CZ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CZ4 entry

There is 1 chain in PDB entry 6CZ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 183SER 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 6CZ4. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
187 189Right-handed 310
Helix 2
AA2
A
223 226Right-handed 310
Helix 3
AA3
A
228 241Right-handed alpha
Helix 4
AA4
A
272 279Right-handed alpha
Helix 5
AA5
A
285 306Right-handed alpha
Helix 6
AA6
A
314 316Right-handed 310
Helix 7
AA7
A
338 343Right-handed alpha
Helix 8
AA8
A
350 354Right-handed 310
Helix 9
AA9
A
355 362Right-handed alpha
Helix 10
AB1
A
365 381Right-handed alpha
Helix 11
AB2
A
392 403Right-handed alpha
Helix 12
AB3
A
413 424Right-handed alpha
Helix 13
AB4
A
427 431Right-handed 310
Helix 14
AB5
A
433 442Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6CZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
191 200first strand
Strand 2
A
203 210anti-parallel
Strand 3
A
214 221anti-parallel
Strand 4
A
260 264anti-parallel
Strand 5
A
250 254anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
270 271first strand
Strand 2
A
318 320anti-parallel
Strand 3
A
326 328anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il