Analysis of interatomic Contacts of Structural Units in PDB entry:
6CZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CZK entry

There are 2 chains in PDB entry 6CZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2SER 118
A
 TRP 120VAL 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6CZK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 20Right-handed alpha
Helix 2
AA2
A
25 49Right-handed alpha
Helix 3
AA3
A
64 73Right-handed alpha
Helix 4
AA4
A
100 104Right-handed alpha
Helix 5
AA5
A
118 137Right-handed alpha
Helix 6
AA6
A
143 151Right-handed alpha
Helix 7
AA7
A
152 155Right-handed 310
Helix 8
AA8
A
157 161Right-handed 310
Helix 9
AA9
A
163 175Right-handed alpha
Helix 10
AB1
A
195 197Right-handed 310
Helix 11
AB2
A
213 224Right-handed alpha
Helix 12
AB3
A
234 239Right-handed alpha
Helix 13
AB4
A
253 257Right-handed 310
Helix 14
AB5
A
298 302Right-handed 310
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There are 4 sheets in PDB entry 6CZK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
240 245anti-parallel
Strand 3
A
290 294parallel
Strand 4
A
272 278anti-parallel
Strand 5
A
259 269anti-parallel
Strand 6
A
98 99anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
240 245anti-parallel
Strand 3
A
290 294parallel
Strand 4
A
272 278anti-parallel
Strand 5
A
259 269anti-parallel
Strand 6
A
227 231anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
199 201anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 208first strand
Strand 2
A
307 311anti-parallel
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