Analysis of interatomic Contacts of Structural Units in PDB entry:
6CZL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6CZL entry

There are 4 chains in PDB entry 6CZL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 36	LEU 373
B	SER 36	LEU 373
C	SER 36	LEU 373
D	SER 36	LEU 333

There are 68 helices in PDB entry 6CZL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	47	61	Right-handed alpha
Helix 2	AA2	A	89	99	Right-handed alpha
Helix 3	AA3	A	109	117	Right-handed alpha
Helix 4	AA4	A	151	157	Right-handed alpha
Helix 5	AA5	A	175	185	Right-handed alpha
Helix 6	AA6	A	199	205	Right-handed alpha
Helix 7	AA7	A	244	250	Right-handed alpha
Helix 8	AA8	A	252	272	Right-handed alpha
Helix 9	AA9	A	284	294	Right-handed alpha
Helix 10	AB1	A	332	342	Right-handed alpha
Helix 11	AB2	A	361	371	Right-handed alpha
Helix 12	AB3	B	47	61	Right-handed alpha
Helix 13	AB4	B	89	99	Right-handed alpha
Helix 14	AB5	B	109	117	Right-handed alpha
Helix 15	AB6	B	151	158	Right-handed alpha
Helix 16	AB7	B	175	183	Right-handed alpha
Helix 17	AB8	B	197	201	Right-handed 310
Helix 18	AB9	B	244	250	Right-handed alpha
Helix 19	AC1	B	252	271	Right-handed alpha
Helix 20	AC2	B	284	294	Right-handed alpha
Helix 21	AC3	B	332	343	Right-handed alpha
Helix 22	AC4	B	361	372	Right-handed alpha
Helix 23	AC5	C	47	61	Right-handed alpha
Helix 24	AC6	C	89	99	Right-handed alpha
Helix 25	AC7	C	109	117	Right-handed alpha
Helix 26	AC8	C	151	158	Right-handed alpha
Helix 27	AC9	C	175	183	Right-handed alpha
Helix 28	AD1	C	199	204	Right-handed alpha
Helix 29	AD2	C	244	250	Right-handed alpha
Helix 30	AD3	C	252	271	Right-handed alpha
Helix 31	AD4	C	284	294	Right-handed alpha
Helix 32	AD5	C	332	343	Right-handed alpha
Helix 33	AD6	C	361	371	Right-handed alpha
Helix 34	AD7	D	47	61	Right-handed alpha
Helix 35	AD8	D	89	99	Right-handed alpha
Helix 36	AD9	D	109	117	Right-handed alpha
Helix 37	AE1	D	151	158	Right-handed alpha
Helix 38	AE2	D	175	184	Right-handed alpha
Helix 39	AE3	D	199	204	Right-handed alpha
Helix 40	AE4	D	218	223	Right-handed alpha
Helix 41	AE5	D	244	250	Right-handed alpha
Helix 42	AE6	D	252	271	Right-handed alpha
Helix 43	AE7	D	284	295	Right-handed alpha
Helix 44	AE8	D	332	342	Right-handed alpha
Helix 45	AE9	D	361	371	Right-handed alpha
Helix 46	AF1	E	47	61	Right-handed alpha
Helix 47	AF2	E	89	99	Right-handed alpha
Helix 48	AF3	E	109	117	Right-handed alpha
Helix 49	AF4	E	151	157	Right-handed alpha
Helix 50	AF5	E	175	185	Right-handed alpha
Helix 51	AF6	E	199	204	Right-handed alpha
Helix 52	AF7	E	244	250	Right-handed alpha
Helix 53	AF8	E	252	271	Right-handed alpha
Helix 54	AF9	E	284	294	Right-handed alpha
Helix 55	AG1	E	332	343	Right-handed alpha
Helix 56	AG2	E	361	371	Right-handed alpha
Helix 57	AG3	F	47	61	Right-handed alpha
Helix 58	AG4	F	89	99	Right-handed alpha
Helix 59	AG5	F	109	117	Right-handed alpha
Helix 60	AG6	F	151	158	Right-handed alpha
Helix 61	AG7	F	175	184	Right-handed alpha
Helix 62	AG8	F	199	205	Right-handed alpha
Helix 63	AG9	F	217	223	Right-handed alpha
Helix 64	AH1	F	244	250	Right-handed alpha
Helix 65	AH2	F	250	271	Right-handed alpha
Helix 66	AH3	F	284	295	Right-handed alpha
Helix 67	AH4	F	332	343	Right-handed alpha
Helix 68	AH5	F	361	372	Right-handed alpha

There are 19 sheets in PDB entry 6CZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	76	first strand
Strand 2	A	83	88	anti-parallel
Strand 3	A	40	45	parallel
Strand 4	A	104	108	parallel
Strand 5	A	238	243	anti-parallel
Strand 6	A	122	126	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	190	first strand
Strand 2	A	167	171	parallel
Strand 3	A	209	214	parallel
Strand 4	A	134	141	anti-parallel
Strand 5	A	225	226	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	190	first strand
Strand 2	A	167	171	parallel
Strand 3	A	209	214	parallel
Strand 4	A	134	141	anti-parallel
Strand 5	A	232	236	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	305	308	first strand
Strand 2	A	321	329	anti-parallel
Strand 3	A	273	281	anti-parallel
Strand 4	A	345	351	anti-parallel
Strand 5	B	355	357	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	355	357	first strand
Strand 2	C	348	352	anti-parallel
Strand 3	C	273	281	anti-parallel
Strand 4	C	321	329	anti-parallel
Strand 5	C	306	309	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	76	first strand
Strand 2	B	83	88	anti-parallel
Strand 3	B	40	45	parallel
Strand 4	B	104	108	parallel
Strand 5	B	238	243	anti-parallel
Strand 6	B	122	126	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	193	first strand
Strand 2	B	167	171	parallel
Strand 3	B	209	214	parallel
Strand 4	B	134	141	anti-parallel
Strand 5	B	225	236	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	305	308	first strand
Strand 2	B	321	329	anti-parallel
Strand 3	B	273	281	anti-parallel
Strand 4	B	345	352	anti-parallel
Strand 5	C	355	357	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	76	first strand
Strand 2	C	83	88	anti-parallel
Strand 3	C	40	45	parallel
Strand 4	C	104	108	parallel
Strand 5	C	238	243	anti-parallel
Strand 6	C	122	126	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	193	first strand
Strand 2	C	167	171	parallel
Strand 3	C	209	214	parallel
Strand 4	C	134	141	anti-parallel
Strand 5	C	225	236	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	76	first strand
Strand 2	D	83	88	anti-parallel
Strand 3	D	40	45	parallel
Strand 4	D	104	108	parallel
Strand 5	D	238	243	anti-parallel
Strand 6	D	122	126	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	193	first strand
Strand 2	D	167	171	parallel
Strand 3	D	209	214	parallel
Strand 4	D	134	141	anti-parallel
Strand 5	D	225	236	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	305	308	first strand
Strand 2	D	321	329	anti-parallel
Strand 3	D	273	281	anti-parallel
Strand 4	D	345	352	anti-parallel
Strand 5	E	355	357	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	355	357	first strand
Strand 2	F	345	352	anti-parallel
Strand 3	F	273	280	anti-parallel
Strand 4	F	321	329	anti-parallel
Strand 5	F	306	309	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	74	76	first strand
Strand 2	E	83	88	anti-parallel
Strand 3	E	40	45	parallel
Strand 4	E	104	108	parallel
Strand 5	E	238	243	anti-parallel
Strand 6	E	122	126	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	189	193	first strand
Strand 2	E	167	171	parallel
Strand 3	E	209	214	parallel
Strand 4	E	134	141	anti-parallel
Strand 5	E	225	236	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	307	309	first strand
Strand 2	E	321	326	anti-parallel
Strand 3	E	274	281	anti-parallel
Strand 4	E	345	352	anti-parallel
Strand 5	F	355	357	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	74	76	first strand
Strand 2	F	83	88	anti-parallel
Strand 3	F	40	45	parallel
Strand 4	F	104	108	parallel
Strand 5	F	238	243	anti-parallel
Strand 6	F	122	126	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	189	193	first strand
Strand 2	F	167	171	parallel
Strand 3	F	209	214	parallel
Strand 4	F	134	141	anti-parallel
Strand 5	F	225	236	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6CZL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6CZL