Analysis of interatomic Contacts of Structural Units in PDB entry:
6D2X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6D2X entry

There is 1 chain in PDB entry 6D2X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 92GLN 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6D2X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
101 115Right-handed alpha
Helix 2
AA2
A
131 142Right-handed alpha
Helix 3
AA3
A
171 180Right-handed alpha
Helix 4
AA4
A
217 222Right-handed alpha
Helix 5
AA5
A
226 249Right-handed alpha
Helix 6
AA6
A
278 282Right-handed 310
Helix 7
AA7
A
284 302Right-handed alpha
Helix 8
AA8
A
326 330Right-handed 310
Helix 9
AA9
A
332 336Right-handed 310
Helix 10
AB1
A
347 362Right-handed alpha
Helix 11
AB2
A
382 389Right-handed alpha
Helix 12
AB3
A
400 404Right-handed 310
Helix 13
AB4
A
406 415Right-handed alpha
Helix 14
AB5
A
421 426Right-handed alpha
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There are 3 sheets in PDB entry 6D2X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
419 420parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 124first strand
Strand 2
A
147 151parallel
Strand 3
A
183 188parallel
Strand 4
A
253 257parallel
Strand 5
A
307 313parallel
Strand 6
A
338 344parallel
Strand 7
A
366 373parallel
Strand 8
A
396 398parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
207 208anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il