Analysis of interatomic Contacts of Structural Units in PDB entry:
6D32


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6D32 entry

There is 1 chain in PDB entry 6D32 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 36ILE 525
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6D32. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 83Right-handed alpha
Helix 2
AA2
A
84 87Right-handed 310
Helix 3
AA3
A
88 104Right-handed alpha
Helix 4
AA4
A
116 125Right-handed alpha
Helix 5
AA5
A
127 134Right-handed alpha
Helix 6
AA6
A
196 228Right-handed alpha
Helix 7
AA7
A
236 256Right-handed alpha
Helix 8
AA8
A
257 259Right-handed 310
Helix 9
AA9
A
261 268Right-handed alpha
Helix 10
AB1
A
287 318Right-handed alpha
Helix 11
AB2
A
329 352Right-handed alpha
Helix 12
AB3
A
369 377Right-handed alpha
Helix 13
AB4
A
377 1034Right-handed alpha
Helix 14
AB5
A
1037 1056Right-handed alpha
Helix 15
AB6
A
1073 1096Right-handed alpha
Helix 16
AB7
A
1098 1105Right-handed alpha
Helix 17
AB8
A
1106 1117Right-handed alpha
Helix 18
AB9
A
1117 1124Right-handed alpha
Helix 19
AC1
A
1126 472Right-handed alpha
Helix 20
AC2
A
487 505Right-handed alpha
Helix 21
AC3
A
506 510Right-handed 310
Helix 22
AC4
A
511 516Right-handed alpha
Helix 23
AC5
A
516 521Right-handed alpha
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There are 5 sheets in PDB entry 6D32. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
111 113anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
60 61anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
54 55anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 172first strand
Strand 2
A
186 188anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 357first strand
Strand 2
A
362 365anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il