Analysis of interatomic Contacts of Structural Units in PDB entry:
6D7K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6D7K entry

There are 8 chains in PDB entry 6D7K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 12PHE 526
B
 CYS 57ASN 395
C
 GLU 5ALA 169
D
 SER 12ARG 75
E
 THR 11PHE 526
F
 CYS 57ASN 395
G
 LYS 3ALA 169
H
 PRO 7GLN 74
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are110 helices in PDB entry 6D7K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 30Right-handed alpha
Helix 2
AA2
A
31 36Right-handed 310
Helix 3
AA3
A
63 89Right-handed alpha
Helix 4
AA4
A
96 128Right-handed alpha
Helix 5
AA5
A
130 159Right-handed alpha
Helix 6
AA6
A
174 177Right-handed 310
Helix 7
AA7
A
178 189Right-handed alpha
Helix 8
AA8
A
189 194Right-handed alpha
Helix 9
AA9
A
196 205Right-handed alpha
Helix 10
AB1
A
207 212Right-handed alpha
Helix 11
AB2
A
212 227Right-handed alpha
Helix 12
AB3
A
230 241Right-handed alpha
Helix 13
AB4
A
242 258Right-handed alpha
Helix 14
AB5
A
260 294Right-handed alpha
Helix 15
AB6
A
300 309Right-handed alpha
Helix 16
AB7
A
315 321Right-handed alpha
Helix 17
AB8
A
331 340Right-handed alpha
Helix 18
AB9
A
341 353Right-handed alpha
Helix 19
AC1
A
354 357Right-handed 310
Helix 20
AC2
A
365 376Right-handed alpha
Helix 21
AC3
A
382 394Right-handed alpha
Helix 22
AC4
A
397 401Right-handed 310
Helix 23
AC5
A
403 411Right-handed alpha
Helix 24
AC6
A
450 460Right-handed alpha
Helix 25
AC7
A
461 464Right-handed 310
Helix 26
AC8
A
468 474Right-handed alpha
Helix 27
AC9
A
477 485Right-handed alpha
Helix 28
AD1
A
508 514Right-handed alpha
Helix 29
AD2
B
87 91Right-handed 310
Helix 30
AD3
B
97 101Right-handed 310
Helix 31
AD4
B
108 134Right-handed alpha
Helix 32
AD5
B
135 139Right-handed 310
Helix 33
AD6
B
140 147Right-handed alpha
Helix 34
AD7
B
147 165Right-handed alpha
Helix 35
AD8
B
165 173Right-handed alpha
Helix 36
AD9
B
175 207Right-handed alpha
Helix 37
AE1
B
214 224Right-handed alpha
Helix 38
AE2
B
224 240Right-handed alpha
Helix 39
AE3
B
243 253Right-handed alpha
Helix 40
AE4
B
254 265Right-handed alpha
Helix 41
AE5
B
267 273Right-handed alpha
Helix 42
AE6
B
279 303Right-handed alpha
Helix 43
AE7
B
312 340Right-handed alpha
Helix 44
AE8
B
341 345Right-handed 310
Helix 45
AE9
B
353 372Right-handed alpha
Helix 46
AF1
B
373 376Right-handed 310
Helix 47
AF2
B
381 391Right-handed alpha
Helix 48
AF3
C
10 22Right-handed alpha
Helix 49
AF4
C
25 41Right-handed alpha
Helix 50
AF5
C
53 73Right-handed alpha
Helix 51
AF6
C
74 81Right-handed alpha
Helix 52
AF7
C
87 102Right-handed alpha
Helix 53
AF8
C
104 120Right-handed alpha
Helix 54
AF9
C
125 145Right-handed alpha
Helix 55
AG1
C
152 161Right-handed alpha
Helix 56
AG2
D
51 73Right-handed alpha
Helix 57
AG3
E
24 30Right-handed alpha
Helix 58
AG4
E
31 36Right-handed 310
Helix 59
AG5
E
63 90Right-handed alpha
Helix 60
AG6
E
96 128Right-handed alpha
Helix 61
AG7
E
130 158Right-handed alpha
Helix 62
AG8
E
179 189Right-handed alpha
Helix 63
AG9
E
189 194Right-handed alpha
Helix 64
AH1
E
196 205Right-handed alpha
Helix 65
AH2
E
207 212Right-handed alpha
Helix 66
AH3
E
212 227Right-handed alpha
Helix 67
AH4
E
230 241Right-handed alpha
Helix 68
AH5
E
242 258Right-handed alpha
Helix 69
AH6
E
260 294Right-handed alpha
Helix 70
AH7
E
300 309Right-handed alpha
Helix 71
AH8
E
315 322Right-handed alpha
Helix 72
AH9
E
323 325Right-handed 310
Helix 73
AI1
E
331 340Right-handed alpha
Helix 74
AI2
E
341 353Right-handed alpha
Helix 75
AI3
E
354 357Right-handed 310
Helix 76
AI4
E
365 376Right-handed alpha
Helix 77
AI5
E
378 393Right-handed alpha
Helix 78
AI6
E
403 411Right-handed alpha
Helix 79
AI7
E
450 460Right-handed alpha
Helix 80
AI8
E
461 464Right-handed 310
Helix 81
AI9
E
468 473Right-handed alpha
Helix 82
AJ1
E
477 485Right-handed alpha
Helix 83
AJ2
E
508 516Right-handed alpha
Helix 84
AJ3
F
87 91Right-handed 310
Helix 85
AJ4
F
108 134Right-handed alpha
Helix 86
AJ5
F
135 139Right-handed 310
Helix 87
AJ6
F
140 147Right-handed alpha
Helix 88
AJ7
F
147 165Right-handed alpha
Helix 89
AJ8
F
165 173Right-handed alpha
Helix 90
AJ9
F
175 207Right-handed alpha
Helix 91
AK1
F
214 224Right-handed alpha
Helix 92
AK2
F
227 240Right-handed alpha
Helix 93
AK3
F
243 253Right-handed alpha
Helix 94
AK4
F
254 265Right-handed alpha
Helix 95
AK5
F
267 273Right-handed alpha
Helix 96
AK6
F
279 303Right-handed alpha
Helix 97
AK7
F
312 339Right-handed alpha
Helix 98
AK8
F
340 345Right-handed 310
Helix 99
AK9
F
353 372Right-handed alpha
Helix 100
AL1
F
373 376Right-handed 310
Helix 101
AL2
F
381 391Right-handed alpha
Helix 102
AL3
G
10 22Right-handed alpha
Helix 103
AL4
G
25 41Right-handed alpha
Helix 104
AL5
G
53 73Right-handed alpha
Helix 105
AL6
G
74 81Right-handed alpha
Helix 106
AL7
G
87 101Right-handed alpha
Helix 107
AL8
G
104 120Right-handed alpha
Helix 108
AL9
G
125 145Right-handed alpha
Helix 109
AM1
G
152 161Right-handed alpha
Helix 110
AM2
H
51 72Right-handed alpha
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There are 6 sheets in PDB entry 6D7K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 417first strand
Strand 2
A
424 425anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 448first strand
Strand 2
A
437 441anti-parallel
Strand 3
C
163 167anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
13 18first strand
Strand 2
D
22 28anti-parallel
Strand 3
D
33 39anti-parallel
Strand 4
D
42 49anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
416 417first strand
Strand 2
E
424 425anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
444 448first strand
Strand 2
E
437 441anti-parallel
Strand 3
G
163 167anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
14 18first strand
Strand 2
H
22 28anti-parallel
Strand 3
H
33 39anti-parallel
Strand 4
H
42 49anti-parallel
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