Analysis of interatomic Contacts of Structural Units in PDB entry:
6D7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6D7P entry

There is 1 chain in PDB entry 6D7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 28ASP 637
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6D7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 47Right-handed alpha
Helix 2
AA2
A
47 55Right-handed alpha
Helix 3
AA3
A
57 66Right-handed alpha
Helix 4
AA4
A
81 89Right-handed alpha
Helix 5
AA5
A
91 102Right-handed alpha
Helix 6
AA6
A
103 106Right-handed 310
Helix 7
AA7
A
119 127Right-handed alpha
Helix 8
AA8
A
129 139Right-handed alpha
Helix 9
AA9
A
149 153Right-handed 310
Helix 10
AB1
A
165 174Right-handed alpha
Helix 11
AB2
A
175 185Right-handed alpha
Helix 12
AB3
A
198 205Right-handed alpha
Helix 13
AB4
A
208 222Right-handed alpha
Helix 14
AB5
A
230 234Right-handed 310
Helix 15
AB6
A
241 250Right-handed alpha
Helix 16
AB7
A
251 260Right-handed alpha
Helix 17
AB8
A
286 289Right-handed 310
Helix 18
AB9
A
290 298Right-handed alpha
Helix 19
AC1
A
300 302Right-handed 310
Helix 20
AC2
A
303 308Right-handed alpha
Helix 21
AC3
A
309 322Right-handed alpha
Helix 22
AC4
A
324 348Right-handed alpha
Helix 23
AC5
A
379 398Right-handed alpha
Helix 24
AC6
A
398 403Right-handed alpha
Helix 25
AC7
A
404 406Right-handed 310
Helix 26
AC8
A
426 442Right-handed alpha
Helix 27
AC9
A
449 463Right-handed alpha
Helix 28
AD1
A
464 467Right-handed 310
Helix 29
AD2
A
474 487Right-handed alpha
Helix 30
AD3
A
487 514Right-handed alpha
Helix 31
AD4
A
524 537Right-handed alpha
Helix 32
AD5
A
551 577Right-handed alpha
Helix 33
AD6
A
581 607Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6D7P.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 269first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
628 635anti-parallel
Strand 4
A
617 618anti-parallel
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