Analysis of interatomic Contacts of Structural Units in PDB entry:
6D85


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6D85 entry

There are 4 chains in PDB entry 6D85 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 113GLU 145
B
 SER 147GLU 297
A
 SER 113GLU 145
A
 SER 147TRP 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6D85. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
117 122Right-handed alpha
Helix 2
AA2
B
129 144Right-handed alpha
Helix 3
AA3
B
157 166Right-handed alpha
Helix 4
AA4
B
173 177Right-handed 310
Helix 5
AA5
B
178 193Right-handed alpha
Helix 6
AA6
B
199 209Right-handed alpha
Helix 7
AA7
B
215 228Right-handed alpha
Helix 8
AA8
B
234 252Right-handed alpha
Helix 9
AA9
B
253 258Right-handed alpha
Helix 10
AB1
B
260 274Right-handed alpha
Helix 11
AB2
B
282 296Right-handed alpha
Helix 12
AB3
A
117 122Right-handed alpha
Helix 13
AB4
A
129 144Right-handed alpha
Helix 14
AB5
A
157 165Right-handed alpha
Helix 15
AB6
A
173 177Right-handed 310
Helix 16
AB7
A
178 193Right-handed alpha
Helix 17
AB8
A
199 208Right-handed alpha
Helix 18
AB9
A
215 228Right-handed alpha
Helix 19
AC1
A
233 252Right-handed alpha
Helix 20
AC2
A
253 258Right-handed alpha
Helix 21
AC3
A
260 274Right-handed alpha
Helix 22
AC4
A
280 296Right-handed alpha
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There are no sheets in PDB entry 6D85
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