Analysis of interatomic Contacts of Structural Units in PDB entry:
6DD9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DD9 entry

There are 4 chains in PDB entry 6DD9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 111GLN 238
B
 MSE 112GLN 238
D
 GLU 111THR 237
C
 LYS 108THR 237
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6DD9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
111 212Right-handed alpha
Helix 2
AA2
A
217 238Right-handed alpha
Helix 3
AA3
B
113 212Right-handed alpha
Helix 4
AA4
B
217 238Right-handed alpha
Helix 5
AA5
D
112 211Right-handed alpha
Helix 6
AA6
D
219 237Right-handed alpha
Helix 7
AA7
C
109 215Right-handed alpha
Helix 8
AA8
C
222 237Right-handed alpha
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There are no sheets in PDB entry 6DD9
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