Analysis of interatomic Contacts of Structural Units in PDB entry:
6DFQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DFQ entry

There are 8 chains in PDB entry 6DFQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 GLU 2SER 206
F
 LEU 3ALA 241
A
 GLU 2PRO 205
B
 MET 1ALA 241
C
 MET 1SER 206
D
 LEU 3ALA 241
G
 GLU 2TRP 181
H
 LEU 3ALA 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 6DFQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
81 85Right-handed 310
Helix 2
AA2
E
188 192Right-handed 310
Helix 3
AA3
F
129 137Right-handed alpha
Helix 4
AA4
F
196 201Right-handed alpha
Helix 5
AA5
A
81 85Right-handed 310
Helix 6
AA6
B
129 137Right-handed alpha
Helix 7
AA7
B
196 201Right-handed alpha
Helix 8
AA8
C
81 85Right-handed 310
Helix 9
AA9
D
129 137Right-handed alpha
Helix 10
AB1
D
196 201Right-handed alpha
Helix 11
AB2
G
81 85Right-handed 310
Helix 12
AB3
H
129 137Right-handed alpha
Helix 13
AB4
H
196 201Right-handed alpha
Back to top of page

There are 35 sheets in PDB entry 6DFQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 6first strand
Strand 2
E
19 25anti-parallel
Strand 3
E
72 77anti-parallel
Strand 4
E
62 67anti-parallel
Strand 5
E
56 59anti-parallel
Strand 6
A
56 59anti-parallel
Strand 7
A
62 67anti-parallel
Strand 8
A
72 77anti-parallel
Strand 9
A
19 25anti-parallel
Strand 10
A
4 6anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 14first strand
Strand 2
E
110 115parallel
Strand 3
E
86 92anti-parallel
Strand 4
E
32 38anti-parallel
Strand 5
E
45 51anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 14first strand
Strand 2
E
110 115parallel
Strand 3
E
86 92anti-parallel
Strand 4
E
105 106anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
158 160first strand
Strand 2
E
173 182anti-parallel
Strand 3
E
137 142anti-parallel
Strand 4
E
124 130anti-parallel
Strand 5
F
122 127anti-parallel
Strand 6
F
138 148anti-parallel
Strand 7
F
186 195anti-parallel
Strand 8
F
168 170anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
164 168first strand
Strand 2
E
173 182anti-parallel
Strand 3
E
137 142anti-parallel
Strand 4
E
124 130anti-parallel
Strand 5
F
122 127anti-parallel
Strand 6
F
138 148anti-parallel
Strand 7
F
186 195anti-parallel
Strand 8
F
175 176anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
5 7first strand
Strand 2
F
19 24anti-parallel
Strand 3
F
75 81anti-parallel
Strand 4
F
64 72anti-parallel
Strand 5
F
56 61anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 14first strand
Strand 2
F
107 112parallel
Strand 3
F
87 94anti-parallel
Strand 4
F
32 39anti-parallel
Strand 5
F
44 50anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 14first strand
Strand 2
F
107 112parallel
Strand 3
F
87 94anti-parallel
Strand 4
F
102 103anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
162 164first strand
Strand 2
F
153 159anti-parallel
Strand 3
F
205 212anti-parallel
Strand 4
F
231 238anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
110 115parallel
Strand 3
A
86 92anti-parallel
Strand 4
A
32 38anti-parallel
Strand 5
A
45 51anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
110 115parallel
Strand 3
A
86 92anti-parallel
Strand 4
A
105 106anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 160first strand
Strand 2
A
173 182anti-parallel
Strand 3
A
138 142anti-parallel
Strand 4
A
124 130anti-parallel
Strand 5
B
122 127anti-parallel
Strand 6
B
138 148anti-parallel
Strand 7
B
186 195anti-parallel
Strand 8
B
168 170anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 168first strand
Strand 2
A
173 182anti-parallel
Strand 3
A
138 142anti-parallel
Strand 4
A
124 130anti-parallel
Strand 5
B
122 127anti-parallel
Strand 6
B
138 148anti-parallel
Strand 7
B
186 195anti-parallel
Strand 8
B
175 176anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
75 81anti-parallel
Strand 4
B
64 72anti-parallel
Strand 5
B
56 61anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
107 112parallel
Strand 3
B
87 94anti-parallel
Strand 4
B
32 38anti-parallel
Strand 5
B
44 50anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
107 112parallel
Strand 3
B
87 94anti-parallel
Strand 4
B
102 103anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 164first strand
Strand 2
B
153 159anti-parallel
Strand 3
B
205 212anti-parallel
Strand 4
B
231 238anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 6first strand
Strand 2
C
19 25anti-parallel
Strand 3
C
72 77anti-parallel
Strand 4
C
62 67anti-parallel
Strand 5
C
56 59anti-parallel
Strand 6
G
56 59anti-parallel
Strand 7
G
62 67anti-parallel
Strand 8
G
72 77anti-parallel
Strand 9
G
19 25anti-parallel
Strand 10
G
4 6anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 14first strand
Strand 2
C
110 115parallel
Strand 3
C
86 94anti-parallel
Strand 4
C
30 38anti-parallel
Strand 5
C
45 51anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 14first strand
Strand 2
C
110 115parallel
Strand 3
C
86 94anti-parallel
Strand 4
C
105 106anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
159 160first strand
Strand 2
C
173 181anti-parallel
Strand 3
C
137 142anti-parallel
Strand 4
C
124 130anti-parallel
Strand 5
D
122 127anti-parallel
Strand 6
D
138 148anti-parallel
Strand 7
D
186 195anti-parallel
Strand 8
D
168 170anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
164 168first strand
Strand 2
C
173 181anti-parallel
Strand 3
C
137 142anti-parallel
Strand 4
C
124 130anti-parallel
Strand 5
D
122 127anti-parallel
Strand 6
D
138 148anti-parallel
Strand 7
D
186 195anti-parallel
Strand 8
D
175 176anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 7first strand
Strand 2
D
19 25anti-parallel
Strand 3
D
75 81anti-parallel
Strand 4
D
64 72anti-parallel
Strand 5
D
56 61anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 14first strand
Strand 2
D
107 112parallel
Strand 3
D
87 94anti-parallel
Strand 4
D
32 38anti-parallel
Strand 5
D
44 50anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 14first strand
Strand 2
D
107 112parallel
Strand 3
D
87 94anti-parallel
Strand 4
D
102 103anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
162 164first strand
Strand 2
D
153 159anti-parallel
Strand 3
D
205 212anti-parallel
Strand 4
D
231 238anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
10 14first strand
Strand 2
G
110 115parallel
Strand 3
G
86 94anti-parallel
Strand 4
G
30 38anti-parallel
Strand 5
G
45 51anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
10 14first strand
Strand 2
G
110 115parallel
Strand 3
G
86 94anti-parallel
Strand 4
G
105 106anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
124 127first strand
Strand 2
G
139 142anti-parallel
Strand 3
G
173 180anti-parallel
Strand 4
G
164 168anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
4 7first strand
Strand 2
H
19 25anti-parallel
Strand 3
H
75 81anti-parallel
Strand 4
H
64 72anti-parallel
Strand 5
H
56 61anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 14first strand
Strand 2
H
107 112parallel
Strand 3
H
87 94anti-parallel
Strand 4
H
32 38anti-parallel
Strand 5
H
44 50anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 14first strand
Strand 2
H
107 112parallel
Strand 3
H
87 94anti-parallel
Strand 4
H
102 103anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
122 126first strand
Strand 2
H
138 148anti-parallel
Strand 3
H
186 195anti-parallel
Strand 4
H
168 170anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
122 126first strand
Strand 2
H
138 148anti-parallel
Strand 3
H
186 195anti-parallel
Strand 4
H
175 176anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
162 164first strand
Strand 2
H
153 159anti-parallel
Strand 3
H
205 212anti-parallel
Strand 4
H
231 238anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il