Analysis of interatomic Contacts of Structural Units in PDB entry:
6DHK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6DHK entry

There are 12 chains in PDB entry 6DHK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 6	THR 501
B	ASP 6	THR 501
C	ASP 6	THR 501
D	ASP 6	THR 501
E	ASP 6	THR 501
F	ASP 6	THR 501
G	ASP 6	THR 501
H	ASP 6	THR 501
I	ASP 6	THR 501
J	ASP 6	THR 501
K	ASP 6	THR 501
L	ASP 6	THR 501

There are222 helices in PDB entry 6DHK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	26	Right-handed alpha
Helix 2	AA2	A	46	53	Right-handed alpha
Helix 3	AA3	A	100	118	Right-handed alpha
Helix 4	AA4	A	137	155	Right-handed alpha
Helix 5	AA5	A	172	186	Right-handed alpha
Helix 6	AA6	A	193	197	Right-handed 310
Helix 7	AA7	A	202	206	Right-handed 310
Helix 8	AA8	A	210	228	Right-handed alpha
Helix 9	AA9	A	229	236	Right-handed alpha
Helix 10	AB1	A	253	265	Right-handed alpha
Helix 11	AB2	A	287	297	Right-handed alpha
Helix 12	AB3	A	353	363	Right-handed alpha
Helix 13	AB4	A	369	374	Right-handed alpha
Helix 14	AB5	A	375	391	Right-handed alpha
Helix 15	AB6	A	398	418	Right-handed alpha
Helix 16	AB7	A	433	442	Right-handed alpha
Helix 17	AB8	A	444	471	Right-handed alpha
Helix 18	AB9	A	476	495	Right-handed alpha
Helix 19	AC1	B	8	26	Right-handed alpha
Helix 20	AC2	B	27	29	Right-handed 310
Helix 21	AC3	B	46	53	Right-handed alpha
Helix 22	AC4	B	100	118	Right-handed alpha
Helix 23	AC5	B	137	155	Right-handed alpha
Helix 24	AC6	B	172	186	Right-handed alpha
Helix 25	AC7	B	193	197	Right-handed 310
Helix 26	AC8	B	202	206	Right-handed 310
Helix 27	AC9	B	210	228	Right-handed alpha
Helix 28	AD1	B	229	236	Right-handed alpha
Helix 29	AD2	B	253	265	Right-handed alpha
Helix 30	AD3	B	287	297	Right-handed alpha
Helix 31	AD4	B	353	363	Right-handed alpha
Helix 32	AD5	B	369	374	Right-handed alpha
Helix 33	AD6	B	375	391	Right-handed alpha
Helix 34	AD7	B	398	418	Right-handed alpha
Helix 35	AD8	B	433	442	Right-handed alpha
Helix 36	AD9	B	444	471	Right-handed alpha
Helix 37	AE1	B	476	495	Right-handed alpha
Helix 38	AE2	C	8	26	Right-handed alpha
Helix 39	AE3	C	27	29	Right-handed 310
Helix 40	AE4	C	46	53	Right-handed alpha
Helix 41	AE5	C	100	118	Right-handed alpha
Helix 42	AE6	C	137	155	Right-handed alpha
Helix 43	AE7	C	172	186	Right-handed alpha
Helix 44	AE8	C	193	197	Right-handed 310
Helix 45	AE9	C	202	206	Right-handed 310
Helix 46	AF1	C	210	228	Right-handed alpha
Helix 47	AF2	C	229	236	Right-handed alpha
Helix 48	AF3	C	253	265	Right-handed alpha
Helix 49	AF4	C	287	297	Right-handed alpha
Helix 50	AF5	C	353	363	Right-handed alpha
Helix 51	AF6	C	369	374	Right-handed alpha
Helix 52	AF7	C	375	391	Right-handed alpha
Helix 53	AF8	C	398	418	Right-handed alpha
Helix 54	AF9	C	433	442	Right-handed alpha
Helix 55	AG1	C	444	471	Right-handed alpha
Helix 56	AG2	C	477	495	Right-handed alpha
Helix 57	AG3	D	8	26	Right-handed alpha
Helix 58	AG4	D	46	53	Right-handed alpha
Helix 59	AG5	D	100	118	Right-handed alpha
Helix 60	AG6	D	137	155	Right-handed alpha
Helix 61	AG7	D	172	186	Right-handed alpha
Helix 62	AG8	D	193	197	Right-handed 310
Helix 63	AG9	D	202	206	Right-handed 310
Helix 64	AH1	D	213	228	Right-handed alpha
Helix 65	AH2	D	229	236	Right-handed alpha
Helix 66	AH3	D	253	265	Right-handed alpha
Helix 67	AH4	D	287	297	Right-handed alpha
Helix 68	AH5	D	353	363	Right-handed alpha
Helix 69	AH6	D	369	374	Right-handed alpha
Helix 70	AH7	D	375	391	Right-handed alpha
Helix 71	AH8	D	398	418	Right-handed alpha
Helix 72	AH9	D	433	442	Right-handed alpha
Helix 73	AI1	D	444	471	Right-handed alpha
Helix 74	AI2	D	476	495	Right-handed alpha
Helix 75	AI3	E	8	26	Right-handed alpha
Helix 76	AI4	E	46	53	Right-handed alpha
Helix 77	AI5	E	100	118	Right-handed alpha
Helix 78	AI6	E	137	155	Right-handed alpha
Helix 79	AI7	E	172	186	Right-handed alpha
Helix 80	AI8	E	193	197	Right-handed 310
Helix 81	AI9	E	202	206	Right-handed 310
Helix 82	AJ1	E	213	228	Right-handed alpha
Helix 83	AJ2	E	229	236	Right-handed alpha
Helix 84	AJ3	E	253	265	Right-handed alpha
Helix 85	AJ4	E	287	298	Right-handed alpha
Helix 86	AJ5	E	335	339	Right-handed 310
Helix 87	AJ6	E	353	363	Right-handed alpha
Helix 88	AJ7	E	369	374	Right-handed alpha
Helix 89	AJ8	E	375	391	Right-handed alpha
Helix 90	AJ9	E	398	418	Right-handed alpha
Helix 91	AK1	E	433	442	Right-handed alpha
Helix 92	AK2	E	444	472	Right-handed alpha
Helix 93	AK3	E	476	495	Right-handed alpha
Helix 94	AK4	F	8	26	Right-handed alpha
Helix 95	AK5	F	46	53	Right-handed alpha
Helix 96	AK6	F	100	118	Right-handed alpha
Helix 97	AK7	F	137	155	Right-handed alpha
Helix 98	AK8	F	172	186	Right-handed alpha
Helix 99	AK9	F	193	197	Right-handed 310
Helix 100	AL1	F	202	206	Right-handed 310
Helix 101	AL2	F	210	228	Right-handed alpha
Helix 102	AL3	F	229	236	Right-handed alpha
Helix 103	AL4	F	253	265	Right-handed alpha
Helix 104	AL5	F	287	297	Right-handed alpha
Helix 105	AL6	F	353	363	Right-handed alpha
Helix 106	AL7	F	369	374	Right-handed alpha
Helix 107	AL8	F	375	391	Right-handed alpha
Helix 108	AL9	F	398	418	Right-handed alpha
Helix 109	AM1	F	433	442	Right-handed alpha
Helix 110	AM2	F	444	471	Right-handed alpha
Helix 111	AM3	F	476	495	Right-handed alpha
Helix 112	AM4	G	8	26	Right-handed alpha
Helix 113	AM5	G	46	53	Right-handed alpha
Helix 114	AM6	G	100	118	Right-handed alpha
Helix 115	AM7	G	137	155	Right-handed alpha
Helix 116	AM8	G	172	186	Right-handed alpha
Helix 117	AM9	G	193	197	Right-handed 310
Helix 118	AN1	G	202	206	Right-handed 310
Helix 119	AN2	G	211	228	Right-handed alpha
Helix 120	AN3	G	229	236	Right-handed alpha
Helix 121	AN4	G	253	265	Right-handed alpha
Helix 122	AN5	G	287	297	Right-handed alpha
Helix 123	AN6	G	353	363	Right-handed alpha
Helix 124	AN7	G	369	374	Right-handed alpha
Helix 125	AN8	G	375	391	Right-handed alpha
Helix 126	AN9	G	398	418	Right-handed alpha
Helix 127	AO1	G	433	442	Right-handed alpha
Helix 128	AO2	G	444	467	Right-handed alpha
Helix 129	AO3	G	476	495	Right-handed alpha
Helix 130	AO4	H	8	26	Right-handed alpha
Helix 131	AO5	H	46	53	Right-handed alpha
Helix 132	AO6	H	100	118	Right-handed alpha
Helix 133	AO7	H	137	155	Right-handed alpha
Helix 134	AO8	H	172	186	Right-handed alpha
Helix 135	AO9	H	193	197	Right-handed 310
Helix 136	AP1	H	202	206	Right-handed 310
Helix 137	AP2	H	210	228	Right-handed alpha
Helix 138	AP3	H	229	236	Right-handed alpha
Helix 139	AP4	H	253	265	Right-handed alpha
Helix 140	AP5	H	287	297	Right-handed alpha
Helix 141	AP6	H	353	363	Right-handed alpha
Helix 142	AP7	H	369	374	Right-handed alpha
Helix 143	AP8	H	375	391	Right-handed alpha
Helix 144	AP9	H	398	418	Right-handed alpha
Helix 145	AQ1	H	433	442	Right-handed alpha
Helix 146	AQ2	H	444	471	Right-handed alpha
Helix 147	AQ3	H	476	495	Right-handed alpha
Helix 148	AQ4	I	9	26	Right-handed alpha
Helix 149	AQ5	I	27	29	Right-handed 310
Helix 150	AQ6	I	46	53	Right-handed alpha
Helix 151	AQ7	I	100	118	Right-handed alpha
Helix 152	AQ8	I	137	155	Right-handed alpha
Helix 153	AQ9	I	172	186	Right-handed alpha
Helix 154	AR1	I	193	197	Right-handed 310
Helix 155	AR2	I	202	206	Right-handed 310
Helix 156	AR3	I	210	228	Right-handed alpha
Helix 157	AR4	I	229	236	Right-handed alpha
Helix 158	AR5	I	253	265	Right-handed alpha
Helix 159	AR6	I	287	297	Right-handed alpha
Helix 160	AR7	I	353	363	Right-handed alpha
Helix 161	AR8	I	369	374	Right-handed alpha
Helix 162	AR9	I	375	391	Right-handed alpha
Helix 163	AS1	I	398	418	Right-handed alpha
Helix 164	AS2	I	433	442	Right-handed alpha
Helix 165	AS3	I	444	471	Right-handed alpha
Helix 166	AS4	I	476	495	Right-handed alpha
Helix 167	AS5	J	8	26	Right-handed alpha
Helix 168	AS6	J	27	29	Right-handed 310
Helix 169	AS7	J	46	53	Right-handed alpha
Helix 170	AS8	J	100	118	Right-handed alpha
Helix 171	AS9	J	137	155	Right-handed alpha
Helix 172	AT1	J	172	186	Right-handed alpha
Helix 173	AT2	J	193	197	Right-handed 310
Helix 174	AT3	J	202	206	Right-handed 310
Helix 175	AT4	J	213	228	Right-handed alpha
Helix 176	AT5	J	229	236	Right-handed alpha
Helix 177	AT6	J	253	265	Right-handed alpha
Helix 178	AT7	J	287	297	Right-handed alpha
Helix 179	AT8	J	353	363	Right-handed alpha
Helix 180	AT9	J	369	374	Right-handed alpha
Helix 181	AU1	J	375	391	Right-handed alpha
Helix 182	AU2	J	395	418	Right-handed alpha
Helix 183	AU3	J	433	442	Right-handed alpha
Helix 184	AU4	J	444	470	Right-handed alpha
Helix 185	AU5	J	476	495	Right-handed alpha
Helix 186	AU6	K	8	26	Right-handed alpha
Helix 187	AU7	K	27	29	Right-handed 310
Helix 188	AU8	K	46	53	Right-handed alpha
Helix 189	AU9	K	100	118	Right-handed alpha
Helix 190	AV1	K	137	155	Right-handed alpha
Helix 191	AV2	K	172	186	Right-handed alpha
Helix 192	AV3	K	193	197	Right-handed 310
Helix 193	AV4	K	202	206	Right-handed 310
Helix 194	AV5	K	210	228	Right-handed alpha
Helix 195	AV6	K	229	236	Right-handed alpha
Helix 196	AV7	K	253	265	Right-handed alpha
Helix 197	AV8	K	287	297	Right-handed alpha
Helix 198	AV9	K	353	363	Right-handed alpha
Helix 199	AW1	K	369	374	Right-handed alpha
Helix 200	AW2	K	375	391	Right-handed alpha
Helix 201	AW3	K	398	418	Right-handed alpha
Helix 202	AW4	K	433	442	Right-handed alpha
Helix 203	AW5	K	444	471	Right-handed alpha
Helix 204	AW6	K	476	495	Right-handed alpha
Helix 205	AW7	L	8	26	Right-handed alpha
Helix 206	AW8	L	46	53	Right-handed alpha
Helix 207	AW9	L	100	118	Right-handed alpha
Helix 208	AX1	L	137	155	Right-handed alpha
Helix 209	AX2	L	172	186	Right-handed alpha
Helix 210	AX3	L	193	197	Right-handed 310
Helix 211	AX4	L	202	206	Right-handed 310
Helix 212	AX5	L	213	228	Right-handed alpha
Helix 213	AX6	L	229	236	Right-handed alpha
Helix 214	AX7	L	253	265	Right-handed alpha
Helix 215	AX8	L	287	297	Right-handed alpha
Helix 216	AX9	L	353	363	Right-handed alpha
Helix 217	AY1	L	369	374	Right-handed alpha
Helix 218	AY2	L	375	391	Right-handed alpha
Helix 219	AY3	L	398	418	Right-handed alpha
Helix 220	AY4	L	433	442	Right-handed alpha
Helix 221	AY5	L	444	471	Right-handed alpha
Helix 222	AY6	L	477	496	Right-handed alpha

There are 18 sheets in PDB entry 6DHK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	167	first strand
Strand 2	A	89	95	parallel
Strand 3	A	123	129	parallel
Strand 4	A	72	81	anti-parallel
Strand 5	A	57	66	anti-parallel
Strand 6	E	57	66	anti-parallel
Strand 7	E	72	81	anti-parallel
Strand 8	E	123	129	anti-parallel
Strand 9	E	89	95	parallel
Strand 10	E	163	167	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	310	first strand
Strand 2	A	279	286	anti-parallel
Strand 3	A	269	274	anti-parallel
Strand 4	A	246	250	parallel
Strand 5	A	321	324	parallel
Strand 6	A	343	345	parallel
Strand 7	A	366	368	parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	167	first strand
Strand 2	B	89	95	parallel
Strand 3	B	123	129	parallel
Strand 4	B	72	81	anti-parallel
Strand 5	B	57	66	anti-parallel
Strand 6	D	57	66	anti-parallel
Strand 7	D	72	81	anti-parallel
Strand 8	D	123	129	anti-parallel
Strand 9	D	89	95	parallel
Strand 10	D	163	167	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	310	first strand
Strand 2	B	279	286	anti-parallel
Strand 3	B	269	274	anti-parallel
Strand 4	B	246	250	parallel
Strand 5	B	321	324	parallel
Strand 6	B	343	345	parallel
Strand 7	B	366	368	parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	163	167	first strand
Strand 2	C	89	95	parallel
Strand 3	C	123	129	parallel
Strand 4	C	72	81	anti-parallel
Strand 5	C	57	66	anti-parallel
Strand 6	F	57	66	anti-parallel
Strand 7	F	72	81	anti-parallel
Strand 8	F	123	129	anti-parallel
Strand 9	F	89	95	parallel
Strand 10	F	163	167	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	310	first strand
Strand 2	C	279	286	anti-parallel
Strand 3	C	269	274	anti-parallel
Strand 4	C	246	250	parallel
Strand 5	C	321	324	parallel
Strand 6	C	343	345	parallel
Strand 7	C	366	368	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	308	310	first strand
Strand 2	D	279	286	anti-parallel
Strand 3	D	269	274	anti-parallel
Strand 4	D	246	250	parallel
Strand 5	D	321	324	parallel
Strand 6	D	343	345	parallel
Strand 7	D	366	368	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	308	310	first strand
Strand 2	E	279	286	anti-parallel
Strand 3	E	269	274	anti-parallel
Strand 4	E	246	250	parallel
Strand 5	E	321	324	parallel
Strand 6	E	343	345	parallel
Strand 7	E	366	368	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	308	310	first strand
Strand 2	F	279	286	anti-parallel
Strand 3	F	269	274	anti-parallel
Strand 4	F	246	250	parallel
Strand 5	F	321	324	parallel
Strand 6	F	343	345	parallel
Strand 7	F	366	368	parallel

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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	163	167	first strand
Strand 2	G	89	95	parallel
Strand 3	G	123	129	parallel
Strand 4	G	72	81	anti-parallel
Strand 5	G	57	66	anti-parallel
Strand 6	K	57	66	anti-parallel
Strand 7	K	72	81	anti-parallel
Strand 8	K	123	129	anti-parallel
Strand 9	K	89	95	parallel
Strand 10	K	163	167	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	308	310	first strand
Strand 2	G	279	286	anti-parallel
Strand 3	G	269	274	anti-parallel
Strand 4	G	246	250	parallel
Strand 5	G	321	324	parallel
Strand 6	G	343	345	parallel
Strand 7	G	366	368	parallel

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There are 10 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	163	167	first strand
Strand 2	H	89	95	parallel
Strand 3	H	123	129	parallel
Strand 4	H	72	81	anti-parallel
Strand 5	H	57	66	anti-parallel
Strand 6	J	57	66	anti-parallel
Strand 7	J	72	81	anti-parallel
Strand 8	J	123	129	anti-parallel
Strand 9	J	89	95	parallel
Strand 10	J	163	167	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	308	310	first strand
Strand 2	H	279	286	anti-parallel
Strand 3	H	269	274	anti-parallel
Strand 4	H	246	250	parallel
Strand 5	H	321	324	parallel
Strand 6	H	343	345	parallel
Strand 7	H	366	368	parallel

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There are 10 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	163	167	first strand
Strand 2	I	89	95	parallel
Strand 3	I	123	129	parallel
Strand 4	I	72	81	anti-parallel
Strand 5	I	57	66	anti-parallel
Strand 6	L	57	66	anti-parallel
Strand 7	L	72	81	anti-parallel
Strand 8	L	123	129	anti-parallel
Strand 9	L	89	95	parallel
Strand 10	L	163	167	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	308	310	first strand
Strand 2	I	279	286	anti-parallel
Strand 3	I	269	274	anti-parallel
Strand 4	I	246	250	parallel
Strand 5	I	321	324	parallel
Strand 6	I	343	345	parallel
Strand 7	I	366	368	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	308	310	first strand
Strand 2	J	279	286	anti-parallel
Strand 3	J	269	274	anti-parallel
Strand 4	J	246	250	parallel
Strand 5	J	321	324	parallel
Strand 6	J	343	345	parallel
Strand 7	J	366	368	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	308	310	first strand
Strand 2	K	279	286	anti-parallel
Strand 3	K	269	274	anti-parallel
Strand 4	K	246	250	parallel
Strand 5	K	321	324	parallel
Strand 6	K	343	345	parallel
Strand 7	K	366	368	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	308	310	first strand
Strand 2	L	279	286	anti-parallel
Strand 3	L	269	274	anti-parallel
Strand 4	L	246	250	parallel
Strand 5	L	321	324	parallel
Strand 6	L	343	345	parallel
Strand 7	L	366	368	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6DHK

Analysis of interatomic Contacts of Structural Units in PDB entry:
6DHK