Analysis of interatomic Contacts of Structural Units in PDB entry:
6DHT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DHT entry

There is 1 chain in PDB entry 6DHT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 27VAL 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6DHT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 30Right-handed 310
Helix 2
AA2
A
118 132Right-handed alpha
Helix 3
AA3
A
139 144Right-handed alpha
Helix 4
AA4
A
161 164Right-handed 310
Helix 5
AA5
A
190 207Right-handed alpha
Helix 6
AA6
A
207 214Right-handed alpha
Helix 7
AA7
A
226 241Right-handed alpha
Helix 8
AA8
A
264 268Right-handed 310
Helix 9
AA9
A
278 296Right-handed alpha
Helix 10
AB1
A
305 324Right-handed alpha
Helix 11
AB2
A
330 336Right-handed alpha
Helix 12
AB3
A
352 368Right-handed alpha
Helix 13
AB4
A
369 379Right-handed alpha
Helix 14
AB5
A
392 401Right-handed alpha
Helix 15
AB6
A
408 431Right-handed alpha
Helix 16
AB7
A
432 436Right-handed 310
Helix 17
AB8
A
445 449Right-handed 310
Helix 18
AB9
A
452 457Right-handed alpha
Helix 19
AC1
A
457 473Right-handed alpha
Helix 20
AC2
A
474 489Right-handed alpha
Helix 21
AC3
A
512 518Right-handed alpha
Helix 22
AC4
A
546 550Right-handed 310
Helix 23
AC5
A
557 562Right-handed alpha
Helix 24
AC6
A
564 582Right-handed alpha
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There are 3 sheets in PDB entry 6DHT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
46 49anti-parallel
Strand 3
A
86 90anti-parallel
Strand 4
A
76 77anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 72first strand
Strand 2
A
56 61anti-parallel
Strand 3
A
98 104anti-parallel
Strand 4
A
107 113anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 174first strand
Strand 2
A
157 159anti-parallel
Strand 3
A
273 274parallel
Strand 4
A
253 255anti-parallel
Strand 5
A
188 189anti-parallel
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