Analysis of interatomic Contacts of Structural Units in PDB entry:
6DI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DI7 entry

There is 1 chain in PDB entry 6DI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 42LEU 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6DI7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 65Right-handed alpha
Helix 2
AA2
A
98 102Right-handed 310
Helix 3
AA3
A
127 144Right-handed alpha
Helix 4
AA4
A
185 199Right-handed alpha
Helix 5
AA5
A
214 217Right-handed 310
Helix 6
AA6
A
218 228Right-handed alpha
Helix 7
AA7
A
240 244Right-handed 310
Helix 8
AA8
A
250 255Right-handed alpha
Helix 9
AA9
A
272 278Right-handed alpha
Helix 10
AB1
A
281 296Right-handed alpha
Helix 11
AB2
A
299 306Right-handed 310
Helix 12
AB3
A
307 325Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6DI7.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 117first strand
Strand 2
A
154 160anti-parallel
Strand 3
A
81 87parallel
Strand 4
A
166 170anti-parallel
Strand 5
A
45 50parallel
Strand 6
A
203 210parallel
Strand 7
A
234 239parallel
Strand 8
A
265 267parallel
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