Analysis of interatomic Contacts of Structural Units in PDB entry:
6DJA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DJA entry

There is 1 chain in PDB entry 6DJA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 36LYS 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 6DJA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
90 106Right-handed alpha
Helix 2
AA2
A
118 123Right-handed alpha
Helix 3
AA3
A
124 131Right-handed alpha
Helix 4
AA4
A
138 148Right-handed alpha
Helix 5
AA5
A
198 200Right-handed 310
Helix 6
AA6
A
218 230Right-handed alpha
Helix 7
AA7
A
246 257Right-handed alpha
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There are 2 sheets in PDB entry 6DJA. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
46 52anti-parallel
Strand 3
A
55 64anti-parallel
Strand 4
A
67 78anti-parallel
Strand 5
A
81 85anti-parallel
Strand 6
A
109 113parallel
Strand 7
A
134 136parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 165first strand
Strand 2
A
168 173anti-parallel
Strand 3
A
185 188anti-parallel
Strand 4
A
193 197anti-parallel
Strand 5
A
235 238parallel
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