Analysis of interatomic Contacts of Structural Units in PDB entry:
6DJC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DJC entry

There are 2 chains in PDB entry 6DJC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 43ILE 173
B
 SER 42MET 172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6DJC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 69Right-handed alpha
Helix 2
AA2
A
69 76Right-handed alpha
Helix 3
AA3
A
80 84Right-handed 310
Helix 4
AA4
A
96 101Right-handed alpha
Helix 5
AA5
A
106 116Right-handed alpha
Helix 6
AA6
A
121 140Right-handed alpha
Helix 7
AA7
A
144 162Right-handed alpha
Helix 8
AA8
B
61 69Right-handed alpha
Helix 9
AA9
B
69 76Right-handed alpha
Helix 10
AB1
B
80 84Right-handed 310
Helix 11
AB2
B
96 101Right-handed alpha
Helix 12
AB3
B
106 116Right-handed alpha
Helix 13
AB4
B
121 140Right-handed alpha
Helix 14
AB5
B
144 162Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6DJC.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 60first strand
Strand 2
B
170 171anti-parallel
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