Analysis of interatomic Contacts of Structural Units in PDB entry:
6DLG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DLG entry

There is 1 chain in PDB entry 6DLG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 399LYS 855
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6DLG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
425 430Right-handed alpha
Helix 2
AA2
A
460 477Right-handed alpha
Helix 3
AA3
A
499 503Right-handed 310
Helix 4
AA4
A
548 550Right-handed 310
Helix 5
AA5
A
551 566Right-handed alpha
Helix 6
AA6
A
598 600Right-handed 310
Helix 7
AA7
A
601 611Right-handed alpha
Helix 8
AA8
A
613 619Right-handed alpha
Helix 9
AA9
A
621 629Right-handed alpha
Helix 10
AB1
A
796 801Right-handed alpha
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There are 5 sheets in PDB entry 6DLG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
434 437first strand
Strand 2
A
688 695anti-parallel
Strand 3
A
707 714anti-parallel
Strand 4
A
406 415anti-parallel
Strand 5
A
449 455parallel
Strand 6
A
491 497anti-parallel
Strand 7
A
481 488anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
505 514first strand
Strand 2
A
525 533anti-parallel
Strand 3
A
536 544anti-parallel
Strand 4
A
584 590parallel
Strand 5
A
676 682anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
660 661first strand
Strand 2
A
668 669anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
770 773first strand
Strand 2
A
778 783anti-parallel
Strand 3
A
735 744anti-parallel
Strand 4
A
845 855anti-parallel
Strand 5
A
835 842anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
764 765first strand
Strand 2
A
751 756anti-parallel
Strand 3
A
804 811anti-parallel
Strand 4
A
817 824anti-parallel
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