Analysis of interatomic Contacts of Structural Units in PDB entry:
6DMX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DMX entry

There are 10 chains in PDB entry 6DMX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 SER 13GLY 56
C
 ASP 288GLN 312
D
 TRP 591ARG 671
A
 ASP 286LEU 309
B
 LYS 589LEU 672
J
 GLU 16SER 54
H
 GLU 287LEU 309
I
 TRP 591ARG 671
F
 ASP 288LEU 309
G
 ARG 588LEU 672
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6DMX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
15 56Right-handed alpha
Helix 2
AA2
C
290 304Right-handed alpha
Helix 3
AA3
D
591 595Right-handed 310
Helix 4
AA4
D
596 612Right-handed alpha
Helix 5
AA5
D
622 643Right-handed alpha
Helix 6
AA6
D
645 671Right-handed alpha
Helix 7
AA7
A
290 304Right-handed alpha
Helix 8
AA8
B
589 595Right-handed 310
Helix 9
AA9
B
596 612Right-handed alpha
Helix 10
AB1
B
622 643Right-handed alpha
Helix 11
AB2
B
645 672Right-handed alpha
Helix 12
AB3
J
17 54Right-handed alpha
Helix 13
AB4
H
290 304Right-handed alpha
Helix 14
AB5
I
596 612Right-handed alpha
Helix 15
AB6
I
622 643Right-handed alpha
Helix 16
AB7
I
645 671Right-handed alpha
Helix 17
AB8
F
289 304Right-handed alpha
Helix 18
AB9
G
589 595Right-handed 310
Helix 19
AC1
G
596 612Right-handed alpha
Helix 20
AC2
G
622 643Right-handed alpha
Helix 21
AC3
G
645 672Right-handed alpha
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There are no sheets in PDB entry 6DMX
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