Analysis of interatomic Contacts of Structural Units in PDB entry:
6DQL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DQL entry

There are 3 chains in PDB entry 6DQL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 56GLU 282
B
 ASN 56LEU 281
C
 MET 1LEU 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 6DQL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 66Right-handed alpha
Helix 2
AA2
A
66 85Right-handed alpha
Helix 3
AA3
A
89 99Right-handed alpha
Helix 4
AA4
A
103 121Right-handed alpha
Helix 5
AA5
A
125 138Right-handed alpha
Helix 6
AA6
A
143 154Right-handed alpha
Helix 7
AA7
A
158 172Right-handed alpha
Helix 8
AA8
A
173 182Right-handed alpha
Helix 9
AA9
A
184 200Right-handed alpha
Helix 10
AB1
A
202 216Right-handed alpha
Helix 11
AB2
A
222 241Right-handed alpha
Helix 12
AB3
A
244 259Right-handed alpha
Helix 13
AB4
A
261 281Right-handed alpha
Helix 14
AB5
B
57 66Right-handed alpha
Helix 15
AB6
B
66 85Right-handed alpha
Helix 16
AB7
B
89 101Right-handed alpha
Helix 17
AB8
B
103 121Right-handed alpha
Helix 18
AB9
B
125 138Right-handed alpha
Helix 19
AC1
B
143 153Right-handed alpha
Helix 20
AC2
B
158 172Right-handed alpha
Helix 21
AC3
B
173 182Right-handed alpha
Helix 22
AC4
B
186 200Right-handed alpha
Helix 23
AC5
B
202 216Right-handed alpha
Helix 24
AC6
B
222 241Right-handed alpha
Helix 25
AC7
B
244 259Right-handed alpha
Helix 26
AC8
B
261 279Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6DQL
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il