Analysis of interatomic Contacts of Structural Units in PDB entry:
6DRJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6DRJ entry

There are 4 chains in PDB entry 6DRJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 38	PHE 1474
B	CYS 38	PHE 1474
C	CYS 38	PHE 1474
D	CYS 38	PHE 1474

There are204 helices in PDB entry 6DRJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	39	45	Right-handed alpha
Helix 2	AA2	A	126	136	Right-handed alpha
Helix 3	AA3	A	159	177	Right-handed alpha
Helix 4	AA4	A	189	206	Right-handed alpha
Helix 5	AA5	A	274	287	Right-handed alpha
Helix 6	AA6	A	309	322	Right-handed alpha
Helix 7	AA7	A	334	343	Right-handed alpha
Helix 8	AA8	A	351	363	Right-handed alpha
Helix 9	AA9	A	371	388	Right-handed alpha
Helix 10	AB1	A	404	419	Right-handed alpha
Helix 11	AB2	A	428	438	Right-handed alpha
Helix 12	AB3	A	440	449	Right-handed alpha
Helix 13	AB4	A	456	470	Right-handed alpha
Helix 14	AB5	A	472	482	Right-handed alpha
Helix 15	AB6	A	485	490	Right-handed alpha
Helix 16	AB7	A	494	502	Right-handed alpha
Helix 17	AB8	A	506	516	Right-handed alpha
Helix 18	AB9	A	535	548	Right-handed alpha
Helix 19	AC1	A	594	604	Right-handed alpha
Helix 20	AC2	A	610	616	Right-handed alpha
Helix 21	AC3	A	622	638	Right-handed alpha
Helix 22	AC4	A	647	672	Right-handed alpha
Helix 23	AC5	A	675	680	Right-handed alpha
Helix 24	AC6	A	685	688	Right-handed 310
Helix 25	AC7	A	692	699	Right-handed alpha
Helix 26	AC8	A	701	706	Right-handed alpha
Helix 27	AC9	A	707	720	Right-handed alpha
Helix 28	AD1	A	727	737	Right-handed alpha
Helix 29	AD2	A	737	743	Right-handed alpha
Helix 30	AD3	A	748	765	Right-handed alpha
Helix 31	AD4	A	799	807	Right-handed alpha
Helix 32	AD5	A	808	833	Right-handed alpha
Helix 33	AD6	A	841	863	Right-handed alpha
Helix 34	AD7	A	869	878	Right-handed alpha
Helix 35	AD8	A	881	900	Right-handed alpha
Helix 36	AD9	A	904	931	Right-handed alpha
Helix 37	AE1	A	936	972	Right-handed alpha
Helix 38	AE2	A	978	987	Right-handed alpha
Helix 39	AE3	A	987	994	Right-handed alpha
Helix 40	AE4	A	997	1002	Right-handed alpha
Helix 41	AE5	A	1036	1053	Right-handed alpha
Helix 42	AE6	A	1053	1072	Right-handed alpha
Helix 43	AE7	A	1076	1092	Right-handed alpha
Helix 44	AE8	A	1099	1114	Right-handed alpha
Helix 45	AE9	A	1129	1157	Right-handed alpha
Helix 46	AF1	A	1158	1183	Right-handed alpha
Helix 47	AF2	A	1368	1378	Right-handed alpha
Helix 48	AF3	A	1382	1388	Right-handed alpha
Helix 49	AF4	A	1427	1433	Right-handed alpha
Helix 50	AF5	A	1456	1471	Right-handed alpha
Helix 51	AF6	A	1472	1474	Right-handed 310
Helix 52	AF7	B	39	45	Right-handed alpha
Helix 53	AF8	B	126	136	Right-handed alpha
Helix 54	AF9	B	159	177	Right-handed alpha
Helix 55	AG1	B	189	206	Right-handed alpha
Helix 56	AG2	B	274	287	Right-handed alpha
Helix 57	AG3	B	309	322	Right-handed alpha
Helix 58	AG4	B	334	343	Right-handed alpha
Helix 59	AG5	B	351	363	Right-handed alpha
Helix 60	AG6	B	371	388	Right-handed alpha
Helix 61	AG7	B	404	419	Right-handed alpha
Helix 62	AG8	B	428	438	Right-handed alpha
Helix 63	AG9	B	440	449	Right-handed alpha
Helix 64	AH1	B	456	470	Right-handed alpha
Helix 65	AH2	B	472	482	Right-handed alpha
Helix 66	AH3	B	485	490	Right-handed alpha
Helix 67	AH4	B	494	502	Right-handed alpha
Helix 68	AH5	B	506	516	Right-handed alpha
Helix 69	AH6	B	535	548	Right-handed alpha
Helix 70	AH7	B	594	604	Right-handed alpha
Helix 71	AH8	B	610	616	Right-handed alpha
Helix 72	AH9	B	622	638	Right-handed alpha
Helix 73	AI1	B	647	672	Right-handed alpha
Helix 74	AI2	B	675	680	Right-handed alpha
Helix 75	AI3	B	685	688	Right-handed 310
Helix 76	AI4	B	692	699	Right-handed alpha
Helix 77	AI5	B	701	706	Right-handed alpha
Helix 78	AI6	B	707	720	Right-handed alpha
Helix 79	AI7	B	727	737	Right-handed alpha
Helix 80	AI8	B	737	743	Right-handed alpha
Helix 81	AI9	B	748	765	Right-handed alpha
Helix 82	AJ1	B	799	807	Right-handed alpha
Helix 83	AJ2	B	808	833	Right-handed alpha
Helix 84	AJ3	B	841	863	Right-handed alpha
Helix 85	AJ4	B	869	878	Right-handed alpha
Helix 86	AJ5	B	881	900	Right-handed alpha
Helix 87	AJ6	B	904	931	Right-handed alpha
Helix 88	AJ7	B	936	972	Right-handed alpha
Helix 89	AJ8	B	978	987	Right-handed alpha
Helix 90	AJ9	B	987	994	Right-handed alpha
Helix 91	AK1	B	997	1002	Right-handed alpha
Helix 92	AK2	B	1036	1053	Right-handed alpha
Helix 93	AK3	B	1053	1072	Right-handed alpha
Helix 94	AK4	B	1076	1092	Right-handed alpha
Helix 95	AK5	B	1099	1114	Right-handed alpha
Helix 96	AK6	B	1129	1157	Right-handed alpha
Helix 97	AK7	B	1158	1183	Right-handed alpha
Helix 98	AK8	B	1368	1378	Right-handed alpha
Helix 99	AK9	B	1382	1388	Right-handed alpha
Helix 100	AL1	B	1427	1433	Right-handed alpha
Helix 101	AL2	B	1456	1471	Right-handed alpha
Helix 102	AL3	B	1472	1474	Right-handed 310
Helix 103	AL4	C	39	45	Right-handed alpha
Helix 104	AL5	C	126	136	Right-handed alpha
Helix 105	AL6	C	159	177	Right-handed alpha
Helix 106	AL7	C	189	206	Right-handed alpha
Helix 107	AL8	C	274	287	Right-handed alpha
Helix 108	AL9	C	309	322	Right-handed alpha
Helix 109	AM1	C	334	343	Right-handed alpha
Helix 110	AM2	C	351	363	Right-handed alpha
Helix 111	AM3	C	371	388	Right-handed alpha
Helix 112	AM4	C	404	419	Right-handed alpha
Helix 113	AM5	C	428	438	Right-handed alpha
Helix 114	AM6	C	440	449	Right-handed alpha
Helix 115	AM7	C	456	470	Right-handed alpha
Helix 116	AM8	C	472	482	Right-handed alpha
Helix 117	AM9	C	485	490	Right-handed alpha
Helix 118	AN1	C	494	502	Right-handed alpha
Helix 119	AN2	C	506	516	Right-handed alpha
Helix 120	AN3	C	535	548	Right-handed alpha
Helix 121	AN4	C	594	604	Right-handed alpha
Helix 122	AN5	C	610	616	Right-handed alpha
Helix 123	AN6	C	622	638	Right-handed alpha
Helix 124	AN7	C	647	672	Right-handed alpha
Helix 125	AN8	C	675	680	Right-handed alpha
Helix 126	AN9	C	685	688	Right-handed 310
Helix 127	AO1	C	692	699	Right-handed alpha
Helix 128	AO2	C	701	706	Right-handed alpha
Helix 129	AO3	C	707	720	Right-handed alpha
Helix 130	AO4	C	727	737	Right-handed alpha
Helix 131	AO5	C	737	743	Right-handed alpha
Helix 132	AO6	C	748	765	Right-handed alpha
Helix 133	AO7	C	799	807	Right-handed alpha
Helix 134	AO8	C	808	833	Right-handed alpha
Helix 135	AO9	C	841	863	Right-handed alpha
Helix 136	AP1	C	869	879	Right-handed alpha
Helix 137	AP2	C	881	900	Right-handed alpha
Helix 138	AP3	C	904	931	Right-handed alpha
Helix 139	AP4	C	936	972	Right-handed alpha
Helix 140	AP5	C	978	987	Right-handed alpha
Helix 141	AP6	C	987	994	Right-handed alpha
Helix 142	AP7	C	997	1002	Right-handed alpha
Helix 143	AP8	C	1036	1053	Right-handed alpha
Helix 144	AP9	C	1053	1072	Right-handed alpha
Helix 145	AQ1	C	1076	1092	Right-handed alpha
Helix 146	AQ2	C	1099	1114	Right-handed alpha
Helix 147	AQ3	C	1129	1157	Right-handed alpha
Helix 148	AQ4	C	1158	1183	Right-handed alpha
Helix 149	AQ5	C	1368	1378	Right-handed alpha
Helix 150	AQ6	C	1382	1388	Right-handed alpha
Helix 151	AQ7	C	1427	1433	Right-handed alpha
Helix 152	AQ8	C	1456	1471	Right-handed alpha
Helix 153	AQ9	C	1472	1474	Right-handed 310
Helix 154	AR1	D	39	45	Right-handed alpha
Helix 155	AR2	D	126	136	Right-handed alpha
Helix 156	AR3	D	159	177	Right-handed alpha
Helix 157	AR4	D	189	206	Right-handed alpha
Helix 158	AR5	D	274	287	Right-handed alpha
Helix 159	AR6	D	309	322	Right-handed alpha
Helix 160	AR7	D	334	343	Right-handed alpha
Helix 161	AR8	D	351	363	Right-handed alpha
Helix 162	AR9	D	371	388	Right-handed alpha
Helix 163	AS1	D	404	419	Right-handed alpha
Helix 164	AS2	D	428	438	Right-handed alpha
Helix 165	AS3	D	440	449	Right-handed alpha
Helix 166	AS4	D	456	470	Right-handed alpha
Helix 167	AS5	D	472	482	Right-handed alpha
Helix 168	AS6	D	485	490	Right-handed alpha
Helix 169	AS7	D	494	502	Right-handed alpha
Helix 170	AS8	D	506	516	Right-handed alpha
Helix 171	AS9	D	535	548	Right-handed alpha
Helix 172	AT1	D	594	604	Right-handed alpha
Helix 173	AT2	D	610	616	Right-handed alpha
Helix 174	AT3	D	622	638	Right-handed alpha
Helix 175	AT4	D	647	672	Right-handed alpha
Helix 176	AT5	D	675	680	Right-handed alpha
Helix 177	AT6	D	685	688	Right-handed 310
Helix 178	AT7	D	692	699	Right-handed alpha
Helix 179	AT8	D	701	706	Right-handed alpha
Helix 180	AT9	D	707	720	Right-handed alpha
Helix 181	AU1	D	727	737	Right-handed alpha
Helix 182	AU2	D	737	743	Right-handed alpha
Helix 183	AU3	D	748	765	Right-handed alpha
Helix 184	AU4	D	799	807	Right-handed alpha
Helix 185	AU5	D	808	833	Right-handed alpha
Helix 186	AU6	D	841	863	Right-handed alpha
Helix 187	AU7	D	869	878	Right-handed alpha
Helix 188	AU8	D	881	900	Right-handed alpha
Helix 189	AU9	D	904	931	Right-handed alpha
Helix 190	AV1	D	936	972	Right-handed alpha
Helix 191	AV2	D	978	987	Right-handed alpha
Helix 192	AV3	D	987	994	Right-handed alpha
Helix 193	AV4	D	997	1002	Right-handed alpha
Helix 194	AV5	D	1036	1053	Right-handed alpha
Helix 195	AV6	D	1053	1072	Right-handed alpha
Helix 196	AV7	D	1076	1092	Right-handed alpha
Helix 197	AV8	D	1099	1114	Right-handed alpha
Helix 198	AV9	D	1129	1157	Right-handed alpha
Helix 199	AW1	D	1158	1183	Right-handed alpha
Helix 200	AW2	D	1368	1378	Right-handed alpha
Helix 201	AW3	D	1382	1388	Right-handed alpha
Helix 202	AW4	D	1427	1433	Right-handed alpha
Helix 203	AW5	D	1456	1471	Right-handed alpha
Helix 204	AW6	D	1472	1474	Right-handed 310

There are 24 sheets in PDB entry 6DRJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	51	first strand
Strand 2	A	97	99	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	107	first strand
Strand 2	A	235	239	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	120	first strand
Strand 2	A	259	263	parallel
Strand 3	A	213	219	parallel
Strand 4	A	180	183	parallel
Strand 5	A	146	150	parallel
Strand 6	A	301	305	parallel
Strand 7	A	327	330	parallel
Strand 8	A	392	395	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	683	684	first strand
Strand 2	A	690	691	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1356	1357	first strand
Strand 2	A	1343	1350	anti-parallel
Strand 3	A	1323	1335	anti-parallel
Strand 4	A	1409	1419	parallel
Strand 5	A	1396	1400	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1356	1357	first strand
Strand 2	A	1343	1350	anti-parallel
Strand 3	A	1441	1448	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	51	first strand
Strand 2	B	97	99	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	107	first strand
Strand 2	B	235	239	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	120	first strand
Strand 2	B	259	263	parallel
Strand 3	B	213	219	parallel
Strand 4	B	180	183	parallel
Strand 5	B	146	150	parallel
Strand 6	B	301	305	parallel
Strand 7	B	327	330	parallel
Strand 8	B	392	395	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	684	first strand
Strand 2	B	690	691	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1356	1357	first strand
Strand 2	B	1343	1350	anti-parallel
Strand 3	B	1323	1335	anti-parallel
Strand 4	B	1409	1419	parallel
Strand 5	B	1396	1400	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1356	1357	first strand
Strand 2	B	1343	1350	anti-parallel
Strand 3	B	1441	1448	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	51	first strand
Strand 2	C	97	99	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	104	107	first strand
Strand 2	C	235	239	parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	120	first strand
Strand 2	C	259	263	parallel
Strand 3	C	213	219	parallel
Strand 4	C	180	183	parallel
Strand 5	C	146	150	parallel
Strand 6	C	301	305	parallel
Strand 7	C	327	330	parallel
Strand 8	C	392	395	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	683	684	first strand
Strand 2	C	690	691	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1356	1357	first strand
Strand 2	C	1343	1350	anti-parallel
Strand 3	C	1323	1335	anti-parallel
Strand 4	C	1409	1419	parallel
Strand 5	C	1396	1400	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1356	1357	first strand
Strand 2	C	1343	1350	anti-parallel
Strand 3	C	1441	1448	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	49	51	first strand
Strand 2	D	97	99	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	104	107	first strand
Strand 2	D	235	239	parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	120	first strand
Strand 2	D	259	263	parallel
Strand 3	D	213	219	parallel
Strand 4	D	180	183	parallel
Strand 5	D	146	150	parallel
Strand 6	D	301	305	parallel
Strand 7	D	327	330	parallel
Strand 8	D	392	395	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	683	684	first strand
Strand 2	D	690	691	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1356	1357	first strand
Strand 2	D	1343	1350	anti-parallel
Strand 3	D	1323	1335	anti-parallel
Strand 4	D	1409	1419	parallel
Strand 5	D	1396	1400	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1356	1357	first strand
Strand 2	D	1343	1350	anti-parallel
Strand 3	D	1441	1448	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6DRJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6DRJ