Analysis of interatomic Contacts of Structural Units in PDB entry:
6DRM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DRM entry

There is 1 chain in PDB entry 6DRM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 87PHE 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6DRM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 104Right-handed alpha
Helix 2
AA2
A
108 126Right-handed alpha
Helix 3
AA3
A
138 152Right-handed alpha
Helix 4
AA4
A
157 162Right-handed alpha
Helix 5
AA5
A
163 165Right-handed 310
Helix 6
AA6
A
166 175Right-handed alpha
Helix 7
AA7
A
176 181Right-handed alpha
Helix 8
AA8
A
185 189Right-handed 310
Helix 9
AA9
A
194 215Right-handed alpha
Helix 10
AB1
A
218 230Right-handed alpha
Helix 11
AB2
A
232 260Right-handed alpha
Helix 12
AB3
A
265 274Right-handed alpha
Helix 13
AB4
A
275 278Right-handed 310
Helix 14
AB5
A
279 287Right-handed alpha
Helix 15
AB6
A
288 291Right-handed 310
Helix 16
AB7
A
298 310Right-handed alpha
Helix 17
AB8
A
319 321Right-handed 310
Helix 18
AB9
A
323 325Right-handed 310
Helix 19
AC1
A
333 337Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6DRM.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
129 131anti-parallel
Strand 3
A
351 355anti-parallel
Strand 4
A
340 345anti-parallel
Strand 5
A
312 317parallel
Strand 6
A
327 330anti-parallel
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