Analysis of interatomic Contacts of Structural Units in PDB entry:
6DRR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DRR entry

There are 2 chains in PDB entry 6DRR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TRP 259
B
 MET 1ASP 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6DRR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 30Right-handed alpha
Helix 2
AA2
A
42 53Right-handed alpha
Helix 3
AA3
A
65 81Right-handed alpha
Helix 4
AA4
A
97 101Right-handed 310
Helix 5
AA5
A
102 114Right-handed alpha
Helix 6
AA6
A
114 131Right-handed alpha
Helix 7
AA7
A
141 146Right-handed alpha
Helix 8
AA8
A
150 172Right-handed alpha
Helix 9
AA9
A
173 175Right-handed 310
Helix 10
AB1
A
188 197Right-handed alpha
Helix 11
AB2
A
200 210Right-handed alpha
Helix 12
AB3
A
220 233Right-handed alpha
Helix 13
AB4
A
234 237Right-handed 310
Helix 14
AB5
B
17 30Right-handed alpha
Helix 15
AB6
B
42 53Right-handed alpha
Helix 16
AB7
B
65 81Right-handed alpha
Helix 17
AB8
B
97 101Right-handed 310
Helix 18
AB9
B
102 114Right-handed alpha
Helix 19
AC1
B
114 132Right-handed alpha
Helix 20
AC2
B
141 146Right-handed alpha
Helix 21
AC3
B
150 172Right-handed alpha
Helix 22
AC4
B
173 175Right-handed 310
Helix 23
AC5
B
188 197Right-handed alpha
Helix 24
AC6
B
200 210Right-handed alpha
Helix 25
AC7
B
220 233Right-handed alpha
Helix 26
AC8
B
234 237Right-handed 310
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There are 2 sheets in PDB entry 6DRR. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
33 38parallel
Strand 3
A
9 13parallel
Strand 4
A
85 88parallel
Strand 5
A
134 138parallel
Strand 6
A
177 181parallel
Strand 7
A
243 244parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 60first strand
Strand 2
B
33 38parallel
Strand 3
B
9 13parallel
Strand 4
B
85 88parallel
Strand 5
B
134 138parallel
Strand 6
B
177 181parallel
Strand 7
B
243 244parallel
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