Analysis of interatomic Contacts of Structural Units in PDB entry:
6DSR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DSR entry

There are 2 chains in PDB entry 6DSR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 320
B
 MET 1LEU 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6DSR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
25 39Right-handed alpha
Helix 3
AA3
A
41 50Right-handed alpha
Helix 4
AA4
A
51 56Right-handed 310
Helix 5
AA5
A
59 65Right-handed alpha
Helix 6
AA6
A
77 95Right-handed alpha
Helix 7
AA7
A
96 98Right-handed 310
Helix 8
AA8
A
106 109Right-handed 310
Helix 9
AA9
A
112 129Right-handed alpha
Helix 10
AB1
A
142 155Right-handed alpha
Helix 11
AB2
A
166 176Right-handed 310
Helix 12
AB3
A
199 204Right-handed alpha
Helix 13
AB4
A
213 228Right-handed alpha
Helix 14
AB5
A
230 234Right-handed 310
Helix 15
AB6
A
245 256Right-handed alpha
Helix 16
AB7
A
272 280Right-handed alpha
Helix 17
AB8
A
284 286Right-handed 310
Helix 18
AB9
A
293 298Right-handed alpha
Helix 19
AC1
A
301 319Right-handed alpha
Helix 20
AC2
B
2 15Right-handed alpha
Helix 21
AC3
B
25 39Right-handed alpha
Helix 22
AC4
B
41 50Right-handed alpha
Helix 23
AC5
B
51 56Right-handed 310
Helix 24
AC6
B
59 64Right-handed alpha
Helix 25
AC7
B
77 95Right-handed alpha
Helix 26
AC8
B
96 98Right-handed 310
Helix 27
AC9
B
106 109Right-handed 310
Helix 28
AD1
B
112 129Right-handed alpha
Helix 29
AD2
B
142 155Right-handed alpha
Helix 30
AD3
B
166 176Right-handed 310
Helix 31
AD4
B
199 204Right-handed alpha
Helix 32
AD5
B
213 228Right-handed alpha
Helix 33
AD6
B
230 234Right-handed 310
Helix 34
AD7
B
245 256Right-handed alpha
Helix 35
AD8
B
272 280Right-handed alpha
Helix 36
AD9
B
284 286Right-handed 310
Helix 37
AE1
B
293 298Right-handed alpha
Helix 38
AE2
B
301 316Right-handed alpha
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There are 6 sheets in PDB entry 6DSR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 21first strand
Strand 2
A
100 104parallel
Strand 3
A
133 139parallel
Strand 4
A
161 164parallel
Strand 5
A
187 193parallel
Strand 6
A
237 241parallel
Strand 7
A
261 263parallel
Strand 8
A
288 292parallel
Strand 9
A
18 21parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 179first strand
Strand 2
A
184 185anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
211 212anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 21first strand
Strand 2
B
100 104parallel
Strand 3
B
133 139parallel
Strand 4
B
161 164parallel
Strand 5
B
187 193parallel
Strand 6
B
237 241parallel
Strand 7
B
261 263parallel
Strand 8
B
288 292parallel
Strand 9
B
18 21parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 179first strand
Strand 2
B
184 185anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 208first strand
Strand 2
B
211 212anti-parallel
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