Analysis of interatomic Contacts of Structural Units in PDB entry:
6DT0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DT0 entry

There are 4 chains in PDB entry 6DT0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 107ASP 441
B
 ALA 107ASP 441
C
 ALA 107ASP 441
D
 ALA 107ASP 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6DT0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
164 176Right-handed alpha
Helix 2
AA2
A
257 266Right-handed alpha
Helix 3
AA3
A
288 349Right-handed alpha
Helix 4
AA4
A
353 356Right-handed 310
Helix 5
AA5
A
357 380Right-handed alpha
Helix 6
AA6
A
396 405Right-handed alpha
Helix 7
AA7
A
407 432Right-handed alpha
Helix 8
AA8
B
164 176Right-handed alpha
Helix 9
AA9
B
257 269Right-handed alpha
Helix 10
AB1
B
288 350Right-handed alpha
Helix 11
AB2
B
353 356Right-handed 310
Helix 12
AB3
B
357 380Right-handed alpha
Helix 13
AB4
B
396 405Right-handed alpha
Helix 14
AB5
B
408 432Right-handed alpha
Helix 15
AB6
B
437 441Right-handed 310
Helix 16
AB7
C
164 176Right-handed alpha
Helix 17
AB8
C
257 266Right-handed alpha
Helix 18
AB9
C
288 349Right-handed alpha
Helix 19
AC1
C
353 356Right-handed 310
Helix 20
AC2
C
357 380Right-handed alpha
Helix 21
AC3
C
396 405Right-handed alpha
Helix 22
AC4
C
407 432Right-handed alpha
Helix 23
AC5
D
164 176Right-handed alpha
Helix 24
AC6
D
257 269Right-handed alpha
Helix 25
AC7
D
288 350Right-handed alpha
Helix 26
AC8
D
353 356Right-handed 310
Helix 27
AC9
D
357 380Right-handed alpha
Helix 28
AD1
D
396 405Right-handed alpha
Helix 29
AD2
D
408 432Right-handed alpha
Helix 30
AD3
D
437 441Right-handed 310
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There are 6 sheets in PDB entry 6DT0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 159first strand
Strand 2
A
119 123anti-parallel
Strand 3
A
109 113anti-parallel
Strand 4
A
281 285parallel
Strand 5
A
270 275anti-parallel
Strand 6
A
190 193anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 113first strand
Strand 2
B
119 123anti-parallel
Strand 3
B
155 159anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 193first strand
Strand 2
B
270 275anti-parallel
Strand 3
B
282 285anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 159first strand
Strand 2
C
119 123anti-parallel
Strand 3
C
109 113anti-parallel
Strand 4
C
281 285parallel
Strand 5
C
270 275anti-parallel
Strand 6
C
190 193anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
110 113first strand
Strand 2
D
119 123anti-parallel
Strand 3
D
155 159anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
190 193first strand
Strand 2
D
270 275anti-parallel
Strand 3
D
282 285anti-parallel
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