Analysis of interatomic Contacts of Structural Units in PDB entry:
6DUW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DUW entry

There is 1 chain in PDB entry 6DUW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 670LYS 861
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6DUW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
676 703Right-handed alpha
Helix 2
AA2
A
709 730Right-handed alpha
Helix 3
AA3
A
737 766Right-handed alpha
Helix 4
AA4
A
768 793Right-handed alpha
Helix 5
AA5
A
812 847Right-handed alpha
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There are 2 sheets in PDB entry 6DUW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
704 705first strand
Strand 2
A
859 860anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
798 802first strand
Strand 2
A
805 809anti-parallel
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