Analysis of interatomic Contacts of Structural Units in PDB entry:
6DWQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DWQ entry

There are 3 chains in PDB entry 6DWQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLY 159
A
 THR 161THR 219
A
 MET 221GLN 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6DWQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 11Right-handed alpha
Helix 2
AA2
A
12 19Right-handed alpha
Helix 3
AA3
A
62 73Right-handed alpha
Helix 4
AA4
A
102 116Right-handed alpha
Helix 5
AA5
A
131 144Right-handed alpha
Helix 6
AA6
A
218 237Right-handed alpha
Helix 7
AA7
A
241 252Right-handed alpha
Helix 8
AA8
A
258 263Right-handed alpha
Helix 9
AA9
A
268 273Right-handed alpha
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There are 2 sheets in PDB entry 6DWQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 49first strand
Strand 2
A
88 93parallel
Strand 3
A
27 32parallel
Strand 4
A
120 123parallel
Strand 5
A
147 151parallel
Strand 6
A
174 179parallel
Strand 7
A
195 200parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 208first strand
Strand 2
A
212 216anti-parallel
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