Analysis of interatomic Contacts of Structural Units in PDB entry:
6DXN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DXN entry

There are 4 chains in PDB entry 6DXN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 32LEU 222
B
 ASN 32LEU 222
C
 ALA 33LYS 220
D
 ASN 32LEU 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6DXN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 71Right-handed alpha
Helix 2
AA2
A
74 83Right-handed alpha
Helix 3
AA3
A
100 114Right-handed alpha
Helix 4
AA4
A
116 130Right-handed alpha
Helix 5
AA5
A
136 146Right-handed alpha
Helix 6
AA6
A
150 160Right-handed alpha
Helix 7
AA7
A
160 177Right-handed alpha
Helix 8
AA8
A
195 198Right-handed 310
Helix 9
AA9
A
202 219Right-handed alpha
Helix 10
AB1
B
63 71Right-handed alpha
Helix 11
AB2
B
74 82Right-handed alpha
Helix 12
AB3
B
100 114Right-handed alpha
Helix 13
AB4
B
116 130Right-handed alpha
Helix 14
AB5
B
136 148Right-handed alpha
Helix 15
AB6
B
150 159Right-handed alpha
Helix 16
AB7
B
160 177Right-handed alpha
Helix 17
AB8
B
195 198Right-handed 310
Helix 18
AB9
B
202 219Right-handed alpha
Helix 19
AC1
C
63 71Right-handed alpha
Helix 20
AC2
C
74 81Right-handed alpha
Helix 21
AC3
C
100 114Right-handed alpha
Helix 22
AC4
C
116 130Right-handed alpha
Helix 23
AC5
C
136 147Right-handed alpha
Helix 24
AC6
C
150 159Right-handed alpha
Helix 25
AC7
C
160 177Right-handed alpha
Helix 26
AC8
C
195 198Right-handed 310
Helix 27
AC9
C
202 219Right-handed alpha
Helix 28
AD1
D
63 71Right-handed alpha
Helix 29
AD2
D
74 81Right-handed alpha
Helix 30
AD3
D
100 114Right-handed alpha
Helix 31
AD4
D
116 130Right-handed alpha
Helix 32
AD5
D
136 147Right-handed alpha
Helix 33
AD6
D
150 160Right-handed alpha
Helix 34
AD7
D
160 177Right-handed alpha
Helix 35
AD8
D
195 198Right-handed 310
Helix 36
AD9
D
202 219Right-handed alpha
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There are 4 sheets in PDB entry 6DXN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 44first strand
Strand 2
A
191 193anti-parallel
Strand 3
A
184 187anti-parallel
Strand 4
A
55 59anti-parallel
Strand 5
A
90 93parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 44first strand
Strand 2
B
191 193anti-parallel
Strand 3
B
184 187anti-parallel
Strand 4
B
55 59anti-parallel
Strand 5
B
90 93parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 44first strand
Strand 2
C
191 193anti-parallel
Strand 3
C
184 187anti-parallel
Strand 4
C
55 59anti-parallel
Strand 5
C
90 93parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
42 44first strand
Strand 2
D
191 193anti-parallel
Strand 3
D
184 187anti-parallel
Strand 4
D
55 59anti-parallel
Strand 5
D
90 93parallel
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