Analysis of interatomic Contacts of Structural Units in PDB entry:
6DXQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DXQ entry

There are 4 chains in PDB entry 6DXQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 4LEU 341
B
 MET 2LEU 341
C
 MET 2LEU 341
D
 MET 3ILE 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 6DXQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 31Right-handed alpha
Helix 2
AA2
A
42 53Right-handed alpha
Helix 3
AA3
A
53 62Right-handed alpha
Helix 4
AA4
A
71 76Right-handed alpha
Helix 5
AA5
A
81 103Right-handed alpha
Helix 6
AA6
A
121 134Right-handed alpha
Helix 7
AA7
A
158 160Right-handed 310
Helix 8
AA8
A
161 172Right-handed alpha
Helix 9
AA9
A
192 208Right-handed alpha
Helix 10
AB1
A
209 214Right-handed alpha
Helix 11
AB2
A
222 226Right-handed 310
Helix 12
AB3
A
231 242Right-handed alpha
Helix 13
AB4
A
246 251Right-handed alpha
Helix 14
AB5
A
263 274Right-handed alpha
Helix 15
AB6
A
275 277Right-handed 310
Helix 16
AB7
A
303 310Right-handed alpha
Helix 17
AB8
A
313 322Right-handed alpha
Helix 18
AB9
A
322 329Right-handed alpha
Helix 19
AC1
A
329 339Right-handed alpha
Helix 20
AC2
B
15 31Right-handed alpha
Helix 21
AC3
B
42 53Right-handed alpha
Helix 22
AC4
B
53 62Right-handed alpha
Helix 23
AC5
B
81 103Right-handed alpha
Helix 24
AC6
B
121 134Right-handed alpha
Helix 25
AC7
B
158 160Right-handed 310
Helix 26
AC8
B
161 172Right-handed alpha
Helix 27
AC9
B
192 207Right-handed alpha
Helix 28
AD1
B
209 214Right-handed alpha
Helix 29
AD2
B
222 226Right-handed 310
Helix 30
AD3
B
231 242Right-handed alpha
Helix 31
AD4
B
246 251Right-handed alpha
Helix 32
AD5
B
263 274Right-handed alpha
Helix 33
AD6
B
275 277Right-handed 310
Helix 34
AD7
B
303 309Right-handed alpha
Helix 35
AD8
B
313 322Right-handed alpha
Helix 36
AD9
B
322 329Right-handed alpha
Helix 37
AE1
B
329 338Right-handed alpha
Helix 38
AE2
C
15 31Right-handed alpha
Helix 39
AE3
C
42 52Right-handed alpha
Helix 40
AE4
C
53 62Right-handed alpha
Helix 41
AE5
C
72 75Right-handed 310
Helix 42
AE6
C
81 103Right-handed alpha
Helix 43
AE7
C
121 136Right-handed alpha
Helix 44
AE8
C
158 160Right-handed 310
Helix 45
AE9
C
161 172Right-handed alpha
Helix 46
AF1
C
192 208Right-handed alpha
Helix 47
AF2
C
209 214Right-handed alpha
Helix 48
AF3
C
222 226Right-handed alpha
Helix 49
AF4
C
231 242Right-handed alpha
Helix 50
AF5
C
246 251Right-handed alpha
Helix 51
AF6
C
263 274Right-handed alpha
Helix 52
AF7
C
275 277Right-handed 310
Helix 53
AF8
C
303 309Right-handed alpha
Helix 54
AF9
C
313 322Right-handed alpha
Helix 55
AG1
C
322 329Right-handed alpha
Helix 56
AG2
C
329 339Right-handed alpha
Helix 57
AG3
D
15 29Right-handed alpha
Helix 58
AG4
D
46 53Right-handed alpha
Helix 59
AG5
D
53 62Right-handed alpha
Helix 60
AG6
D
72 76Right-handed 310
Helix 61
AG7
D
81 103Right-handed alpha
Helix 62
AG8
D
121 134Right-handed alpha
Helix 63
AG9
D
161 172Right-handed alpha
Helix 64
AH1
D
192 208Right-handed alpha
Helix 65
AH2
D
209 214Right-handed alpha
Helix 66
AH3
D
222 226Right-handed alpha
Helix 67
AH4
D
231 242Right-handed alpha
Helix 68
AH5
D
246 251Right-handed alpha
Helix 69
AH6
D
263 274Right-handed alpha
Helix 70
AH7
D
275 277Right-handed 310
Helix 71
AH8
D
303 310Right-handed alpha
Helix 72
AH9
D
313 322Right-handed alpha
Helix 73
AI1
D
322 329Right-handed alpha
Helix 74
AI2
D
329 338Right-handed alpha
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There are 5 sheets in PDB entry 6DXQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 11first strand
Strand 2
A
65 70parallel
Strand 3
A
107 112parallel
Strand 4
A
139 142parallel
Strand 5
A
175 177parallel
Strand 6
A
219 221parallel
Strand 7
A
255 258parallel
Strand 8
A
279 280parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 11first strand
Strand 2
B
65 70parallel
Strand 3
B
107 111parallel
Strand 4
B
139 142parallel
Strand 5
B
175 177parallel
Strand 6
B
219 221parallel
Strand 7
B
255 258parallel
Strand 8
B
279 280parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 11first strand
Strand 2
C
65 70parallel
Strand 3
C
107 111parallel
Strand 4
C
139 142parallel
Strand 5
C
175 177parallel
Strand 6
C
219 221parallel
Strand 7
C
255 258parallel
Strand 8
C
279 280parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 11first strand
Strand 2
D
65 70parallel
Strand 3
D
107 109parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
140 142first strand
Strand 2
D
175 177parallel
Strand 3
D
219 221parallel
Strand 4
D
255 258parallel
Strand 5
D
279 280parallel
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