Analysis of interatomic Contacts of Structural Units in PDB entry:
6DZY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DZY entry

There are 4 chains in PDB entry 6DZY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 79GLU 615
H
 GLN 20THR 137
L
 ASP 21ILE 130
V
 GLU 16ILE 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6DZY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 97Right-handed alpha
Helix 2
AA2
A
98 110Right-handed alpha
Helix 3
AA3
A
114 128Right-handed alpha
Helix 4
AA4
A
128 144Right-handed alpha
Helix 5
AA5
A
150 155Right-handed alpha
Helix 6
AA6
A
156 158Right-handed 310
Helix 7
AA7
A
159 191Right-handed alpha
Helix 8
AA8
A
205 209Right-handed 310
Helix 9
AA9
A
226 235Right-handed alpha
Helix 10
AB1
A
238 242Right-handed 310
Helix 11
AB2
A
252 272Right-handed alpha
Helix 12
AB3
A
273 285Right-handed alpha
Helix 13
AB4
A
286 302Right-handed alpha
Helix 14
AB5
A
304 314Right-handed alpha
Helix 15
AB6
A
316 321Right-handed 310
Helix 16
AB7
A
322 338Right-handed alpha
Helix 17
AB8
A
342 349Right-handed alpha
Helix 18
AB9
A
356 391Right-handed alpha
Helix 19
AC1
A
401 417Right-handed alpha
Helix 20
AC2
A
422 454Right-handed alpha
Helix 21
AC3
A
454 459Right-handed alpha
Helix 22
AC4
A
461 482Right-handed alpha
Helix 23
AC5
A
486 497Right-handed alpha
Helix 24
AC6
A
498 514Right-handed alpha
Helix 25
AC7
A
517 530Right-handed alpha
Helix 26
AC8
A
536 543Right-handed alpha
Helix 27
AC9
A
543 557Right-handed alpha
Helix 28
AD1
A
571 585Right-handed alpha
Helix 29
AD2
A
587 600Right-handed alpha
Helix 30
AD3
A
603 613Right-handed alpha
Helix 31
AD4
H
47 51Right-handed 310
Helix 32
AD5
H
82 85Right-handed 310
Helix 33
AD6
H
106 110Right-handed 310
Helix 34
AD7
H
120 124Right-handed 310
Helix 35
AD8
L
103 107Right-handed 310
Helix 36
AD9
V
43 47Right-handed 310
Helix 37
AE1
V
77 80Right-handed 310
Helix 38
AE2
V
89 91Right-handed 310
Helix 39
AE3
V
102 106Right-handed 310
Helix 40
AE4
V
228 232Right-handed 310
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There are 13 sheets in PDB entry 6DZY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
22 25first strand
Strand 2
H
41 44anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
29 30first strand
Strand 2
H
134 137parallel
Strand 3
H
111 117anti-parallel
Strand 4
H
53 58anti-parallel
Strand 5
H
64 70anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
37 39first strand
Strand 2
H
97 102anti-parallel
Strand 3
H
87 92anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
24 25first strand
Strand 2
L
39 45anti-parallel
Strand 3
L
94 99anti-parallel
Strand 4
L
89 90anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
30 32first strand
Strand 2
L
126 129parallel
Strand 3
L
108 114anti-parallel
Strand 4
L
57 62anti-parallel
Strand 5
L
69 73anti-parallel
Strand 6
L
77 78anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
30 32first strand
Strand 2
L
126 129parallel
Strand 3
L
108 114anti-parallel
Strand 4
L
121 122anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
50 51first strand
Strand 2
L
54 55anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
18 21first strand
Strand 2
V
33 40anti-parallel
Strand 3
V
93 98anti-parallel
Strand 4
V
83 88anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
25 26first strand
Strand 2
V
128 131parallel
Strand 3
V
107 113anti-parallel
Strand 4
V
51 54anti-parallel
Strand 5
V
60 66anti-parallel
Strand 6
V
73 75anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
25 26first strand
Strand 2
V
128 131parallel
Strand 3
V
107 113anti-parallel
Strand 4
V
123 124anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
153 155first strand
Strand 2
V
168 178anti-parallel
Strand 3
V
211 224anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
184 185first strand
Strand 2
V
195 198anti-parallel
Strand 3
V
202 203anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
234 235first strand
Strand 2
V
251 252anti-parallel
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