Analysis of interatomic Contacts of Structural Units in PDB entry:
6DZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DZZ entry

There are 3 chains in PDB entry 6DZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 78PRO 617
B
 GLN 20THR 137
C
 ASP 21ILE 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6DZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
81 97Right-handed alpha
Helix 2
AA2
A
103 112Right-handed alpha
Helix 3
AA3
A
117 128Right-handed alpha
Helix 4
AA4
A
129 144Right-handed alpha
Helix 5
AA5
A
150 154Right-handed 310
Helix 6
AA6
A
159 176Right-handed alpha
Helix 7
AA7
A
176 189Right-handed alpha
Helix 8
AA8
A
226 234Right-handed alpha
Helix 9
AA9
A
252 268Right-handed alpha
Helix 10
AB1
A
279 285Right-handed alpha
Helix 11
AB2
A
285 293Right-handed alpha
Helix 12
AB3
A
294 302Right-handed alpha
Helix 13
AB4
A
310 314Right-handed 310
Helix 14
AB5
A
325 337Right-handed alpha
Helix 15
AB6
A
343 351Right-handed alpha
Helix 16
AB7
A
356 390Right-handed alpha
Helix 17
AB8
A
405 416Right-handed alpha
Helix 18
AB9
A
419 441Right-handed alpha
Helix 19
AC1
A
443 448Right-handed alpha
Helix 20
AC2
A
449 453Right-handed 310
Helix 21
AC3
A
464 476Right-handed alpha
Helix 22
AC4
A
485 490Right-handed alpha
Helix 23
AC5
A
490 495Right-handed alpha
Helix 24
AC6
A
498 514Right-handed alpha
Helix 25
AC7
A
517 529Right-handed alpha
Helix 26
AC8
A
534 539Right-handed alpha
Helix 27
AC9
A
544 559Right-handed alpha
Helix 28
AD1
A
572 583Right-handed alpha
Helix 29
AD2
A
587 596Right-handed alpha
Helix 30
AD3
A
603 613Right-handed alpha
Helix 31
AD4
B
47 51Right-handed 310
Helix 32
AD5
C
103 107Right-handed 310
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There are 5 sheets in PDB entry 6DZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 25first strand
Strand 2
B
39 43anti-parallel
Strand 3
B
97 102anti-parallel
Strand 4
B
87 92anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 79first strand
Strand 2
B
65 71anti-parallel
Strand 3
B
53 58anti-parallel
Strand 4
B
112 117anti-parallel
Strand 5
B
134 135anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 31first strand
Strand 2
C
127 128parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 78first strand
Strand 2
C
69 73anti-parallel
Strand 3
C
58 62anti-parallel
Strand 4
C
109 113anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 90first strand
Strand 2
C
95 98anti-parallel
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