Analysis of interatomic Contacts of Structural Units in PDB entry:
6E0U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E0U entry

There are 2 chains in PDB entry 6E0U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 33GLU 275
B
 GLU 36GLU 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6E0U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 43Right-handed alpha
Helix 2
AA2
A
44 47Right-handed 310
Helix 3
AA3
A
65 67Right-handed 310
Helix 4
AA4
A
156 161Right-handed alpha
Helix 5
AA5
A
263 272Right-handed alpha
Helix 6
AA6
A
273 275Right-handed 310
Helix 7
AA7
B
38 43Right-handed alpha
Helix 8
AA8
B
44 47Right-handed 310
Helix 9
AA9
B
65 67Right-handed 310
Helix 10
AB1
B
93 98Right-handed alpha
Helix 11
AB2
B
99 101Right-handed 310
Helix 12
AB3
B
156 161Right-handed alpha
Helix 13
AB4
B
263 272Right-handed alpha
Helix 14
AB5
B
273 275Right-handed 310
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There are 7 sheets in PDB entry 6E0U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
193 201anti-parallel
Strand 3
A
206 207anti-parallel
Strand 4
A
240 245anti-parallel
Strand 5
A
227 235anti-parallel
Strand 6
A
219 221anti-parallel
Strand 7
A
177 182anti-parallel
Strand 8
A
193 201anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
A
78 84anti-parallel
Strand 3
A
89 92anti-parallel
Strand 4
A
144 148anti-parallel
Strand 5
A
127 133anti-parallel
Strand 6
A
107 111anti-parallel
Strand 7
A
69 74anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 250first strand
Strand 2
A
261 262anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 57first strand
Strand 2
B
193 201anti-parallel
Strand 3
B
206 207anti-parallel
Strand 4
B
240 245anti-parallel
Strand 5
B
227 235anti-parallel
Strand 6
B
219 221anti-parallel
Strand 7
B
177 182anti-parallel
Strand 8
B
193 201anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 74first strand
Strand 2
B
78 84anti-parallel
Strand 3
B
89 92anti-parallel
Strand 4
B
144 148anti-parallel
Strand 5
B
127 133anti-parallel
Strand 6
B
107 111anti-parallel
Strand 7
B
69 74anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 116first strand
Strand 2
B
119 121anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 250first strand
Strand 2
B
261 262anti-parallel
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