Analysis of interatomic Contacts of Structural Units in PDB entry:
6E16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E16 entry

There is 1 chain in PDB entry 6E16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 9MET 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6E16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 25Right-handed alpha
Helix 2
AA2
A
27 36Right-handed 310
Helix 3
AA3
A
197 204Right-handed alpha
Helix 4
AA4
A
205 207Right-handed 310
Helix 5
AA5
A
281 289Right-handed alpha
Helix 6
AA6
A
328 347Right-handed alpha
Helix 7
AA7
A
371 379Right-handed alpha
Helix 8
AA8
A
419 437Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6E16.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 293first strand
Strand 2
A
302 306anti-parallel
Strand 3
A
311 315anti-parallel
Strand 4
A
320 326anti-parallel
Strand 5
A
266 275anti-parallel
Strand 6
A
353 365anti-parallel
Strand 7
A
411 417anti-parallel
Strand 8
A
402 406anti-parallel
Strand 9
A
393 397anti-parallel
Strand 10
A
383 384anti-parallel
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