Analysis of interatomic Contacts of Structural Units in PDB entry:
6E18


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E18 entry

There is 1 chain in PDB entry 6E18 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 23ASN 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6E18. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
168 177Right-handed alpha
Helix 2
AA2
A
191 194Right-handed 310
Helix 3
AA3
A
195 201Right-handed alpha
Helix 4
AA4
A
355 359Right-handed 310
Helix 5
AA5
A
372 378Right-handed alpha
Helix 6
AA6
A
381 385Right-handed 310
Helix 7
AA7
A
394 408Right-handed alpha
Helix 8
AA8
A
415 419Right-handed 310
Helix 9
AA9
A
426 430Right-handed 310
Helix 10
AB1
A
476 480Right-handed 310
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There are 9 sheets in PDB entry 6E18. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 35first strand
Strand 2
A
42 54anti-parallel
Strand 3
A
447 453anti-parallel
Strand 4
A
302 309anti-parallel
Strand 5
A
294 296anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 288first strand
Strand 2
A
232 239anti-parallel
Strand 3
A
97 105anti-parallel
Strand 4
A
63 69anti-parallel
Strand 5
A
457 462anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
109 112anti-parallel
Strand 3
A
437 440anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 121first strand
Strand 2
A
217 223anti-parallel
Strand 3
A
323 327anti-parallel
Strand 4
A
352 354anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
206 212anti-parallel
Strand 3
A
163 166anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
155 156anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 475first strand
Strand 2
A
492 500anti-parallel
Strand 3
A
534 536anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 475first strand
Strand 2
A
492 500anti-parallel
Strand 3
A
541 543anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 486first strand
Strand 2
A
567 578parallel
Strand 3
A
551 561anti-parallel
Strand 4
A
506 513anti-parallel
Strand 5
A
525 529anti-parallel
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