Analysis of interatomic Contacts of Structural Units in PDB entry:
6E1C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E1C entry

There are 2 chains in PDB entry 6E1C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 25ARG 374
B
 ALA 25ARG 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6E1C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 58Right-handed alpha
Helix 2
AA2
A
69 73Right-handed 310
Helix 3
AA3
A
75 79Right-handed 310
Helix 4
AA4
A
104 108Right-handed 310
Helix 5
AA5
A
120 125Right-handed alpha
Helix 6
AA6
A
125 131Right-handed alpha
Helix 7
AA7
A
143 153Right-handed alpha
Helix 8
AA8
A
154 165Right-handed alpha
Helix 9
AA9
A
173 186Right-handed alpha
Helix 10
AB1
A
193 201Right-handed alpha
Helix 11
AB2
A
206 217Right-handed alpha
Helix 12
AB3
A
223 228Right-handed alpha
Helix 13
AB4
A
269 274Right-handed alpha
Helix 14
AB5
A
275 279Right-handed 310
Helix 15
AB6
A
289 293Right-handed 310
Helix 16
AB7
A
304 314Right-handed alpha
Helix 17
AB8
A
344 356Right-handed alpha
Helix 18
AB9
A
357 359Right-handed 310
Helix 19
AC1
A
366 370Right-handed 310
Helix 20
AC2
B
46 58Right-handed alpha
Helix 21
AC3
B
59 63Right-handed 310
Helix 22
AC4
B
69 73Right-handed 310
Helix 23
AC5
B
75 79Right-handed 310
Helix 24
AC6
B
104 108Right-handed 310
Helix 25
AC7
B
120 125Right-handed alpha
Helix 26
AC8
B
125 130Right-handed alpha
Helix 27
AC9
B
173 187Right-handed alpha
Helix 28
AD1
B
193 199Right-handed alpha
Helix 29
AD2
B
206 218Right-handed alpha
Helix 30
AD3
B
222 226Right-handed 310
Helix 31
AD4
B
267 272Right-handed 310
Helix 32
AD5
B
289 293Right-handed 310
Helix 33
AD6
B
304 314Right-handed alpha
Helix 34
AD7
B
329 331Right-handed 310
Helix 35
AD8
B
344 357Right-handed alpha
Helix 36
AD9
B
361 366Right-handed alpha
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There are 3 sheets in PDB entry 6E1C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 250first strand
Strand 2
A
281 282anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 319first strand
Strand 2
A
326 327anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
318 319first strand
Strand 2
B
326 327anti-parallel
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